Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq532 100 3e-16 >seq532 Length=46805 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| | ||| | ||||| || || || ||||| |||||| |||||||||||| Sbjct 27944 TTTTCTTTTTGATCGGAAATATAAGTTTCGATGAGTAAGGAATACATCTCAGAATGAATA 27885 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || || ||||| || || || ||||| | ||||| | | || || || | | Sbjct 27884 TTTTCTATGGCGATCTGGAAGCCGTAGAAACAACGTGCTTCCGCGATTTTCACCTCTTGA 27825 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 ||||| | | | ||| || ||||| || ||||| |||||||||||| || | Sbjct 27824 CTGAATCTCTCAATCAGATTCTCATTAACGATTCCATCGGAAGCAGCAAAGAACGCCAAG 27765 Query 23941 ACATATTTTATAAAATGTCTTTCATCAG 23968 |||| ||||| | |||||| |||| Sbjct 27764 ACATGAGAGATAAAGTATCTTTCGTCAG 27737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521248089445600