Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_033745.1 Length=7991 Score E Sequences producing significant alignments: (Bits) Value seq8046 123 1e-24 >seq8046 Length=7925 Score = 123 bits (136), Expect = 1e-24 Identities = 222/314 (71%), Gaps = 8/314 (3%) Strand=Plus/Plus Query 2225 ATACAGGCAAATC-TATGTTCGGCATGAGTCTGATGAAGTTTATGAGTGGGGCAGTGTTG 2283 ||||||||||||| ||| ||| |||||||||| || |||| | |||| || || | Sbjct 4178 ATACAGGCAAATCATAT-TTCTGCATGAGTCTTTTGCAGTTCCTAGGTGGCGCTGTAATA 4236 Query 2284 TCCTATGTGAACTCTAGAAGCCAGTTTTGGCTGCAGCCTATCG-TGAGGGCTAAAGTGGC 2342 || |||| || || || ||||| |||||||||||||| | | ||| | | | || Sbjct 4237 TCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAGGA 4296 Query 2343 CATGTTGGATGATGCCACAGGCGCA-TGCTGGACATATATAAATGTATACCTGCGTAACA 2401 | | |||| ||||| || ||| || |||||||| ||||| || ||| || | ||| Sbjct 4297 C-TACTGGACGATGCGAC-GGCCCAGTGCTGGACGTATATTGATACATATCTTAGGAACC 4354 Query 2402 TGCTAGATGGAAACCCCATCAGCGTGGATATGAAACATAAAGCACCATTACAGACAGTTT 2461 | ||||||||||||||| |||| | || | ||||||||| | | | |||| | | Sbjct 4355 TACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATAAGACCCTGCTGCAGATAAAAT 4414 Query 2462 GTCCCCCTCTGCTGATCACATCAAACATAAA-CATCAGTGAGGATGAGAATCACAAGTAT 2520 |||| || | |||| ||| | |||||||| | || ||||| || | |||||| Sbjct 4415 GTCCTCCATTAATGATAACAACCAACATAAATCCTC-TAGAGGAGGACAGATGGAAGTAT 4473 Query 2521 TTGCACAGCAGGGT 2534 |||| |||||| || Sbjct 4474 TTGCGCAGCAGAGT 4487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 25445460070480