Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq8063 113 5e-20 seq12692 84.2 2e-11 >seq8063 Length=21912 Score = 113 bits (124), Expect = 5e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 |||||| || || || || || || || || ||||| || || ||||| || |||| Sbjct 13767 ATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAAATG 13826 Query 17413 TTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 |||||| || | | | | |||||| || |||||||| |||| ||| |||||||| Sbjct 13827 TTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTCTTC 13886 Query 17473 GGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTAT 17532 ||||||||| ||| |||| ||||||||||| | ||| ||||| | ||| | || Sbjct 13887 AACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTCAAT 13946 Query 17533 GGGGAATACAACATATCTATCTAAGGAT--TCCTTTAA 17568 || ||||||||| ||||| | |||| |||||||| Sbjct 13947 TGGAAATACAACAAATCTACGT--GGATTCTCCTTTAA 13982 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 |||||| || || ||||||||||||||||| ||||||||| ||||||||| || | Sbjct 8996 TAATCTGTCTGCAACAAATTCTATATATTGTTTCATTAATTCATTGTTCATTCCAATTAA 9055 Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || || | |||||| ||||| ||| |||| || ||| | || || || |||| || Sbjct 9056 AGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTCAATAGCCACTGCATCAGTAATTAT 9115 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTA-TGTTTAAGATGTTTAAACATCAGACATGCGA 16970 |||||| || || | ||| || | |||| || ||||||| || ||||| | Sbjct 9116 TTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAAG-TGGCTAAACATGAGGCATGCAA 9174 Query 16971 AATCGCAATGTAATCCCT 16988 |||| ||||| | |||| Sbjct 9175 AATCACAATGAAGACCCT 9192 >seq12692 Length=15378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 119861 CCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTATCGTTTAAGTAGATA-CA 119919 || || || ||||| || || ||||| || || |||||||| || | || ||| || Sbjct 4820 CCTACATAACCGTTAGGGTCACGACCATCCAATTCATATTTATCATTGAGATAAATAGCA 4879 Query 119920 GACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAGCCCAGTACAT 119979 | | || || ||||||| | | ||||||| |||||||| || ||||| ||||| Sbjct 4880 ATCTCC-AATGCCTCTTCAGGACTGTTAGTCCATTCAAGTATTTTCTTTGCCCAATACAT 4938 Query 119980 ACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGA 120019 ||||| ||||||||||||| ||||| ||||||||| Sbjct 4939 ACGTAGAAATCCATGCATTTTCCCTTCTTTGACCATTTGA 4978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516563466653520