Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2028 136 3e-27 >seq2028 Length=121951 Score = 136 bits (150), Expect = 3e-27 Identities = 113/138 (82%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 101681 AGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCA 101740 |||||||||| ||||| | ||| |||||||||||||| |||||||| | ||| ||||| Sbjct 83202 AGAGCATCAACATGATCAAGATATATGTGAGCATCTCCAATAGTATGAACAAAGTCTCCT 83143 Query 101741 GGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTA 101800 || |||| ||| ||||||||||||||| |||| || | ||| ||||| ||||| ||| Sbjct 83142 GGTTTTAGACCAGTTACATGAGCAATCATGTAAGTCAACAAAGAGTAGCTTGCAATATTA 83083 Query 101801 AATGGCACTCCTAACCCC 101818 ||||| |||||||| ||| Sbjct 83082 AATGGAACTCCTAAGCCC 83065 Score = 96.9 bits (106), Expect = 2e-15 Identities = 123/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTA-TAGTATCAATCA 101984 |||||||||| | | || |||||||| || || ||||| | |||| || |||||| | Sbjct 76421 ATTCCAAGCAGAAAGTATCATCCTTCGGTCA-TAAGGTTTCTCTTTAATAAGATCAATTA 76363 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTG 102044 | ||||||||| ||||||||||| |||||| | | | || |||||| | Sbjct 76362 TATATTTTAATTGATCAACTCCTTCATTAGAATAATCTTTACTCATATCTACATATTCAG 76303 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 | || ||||| | ||| ||||| ||||| ||||| |||||||||||| Sbjct 76302 CACCAAAATGTCGCCATTGAAAGCCATAAACAGGACCAAGATCTCCT 76256 Score = 96.9 bits (106), Expect = 2e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 101817 CCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATT 101876 ||||||| |||||||||||||||| |||||| || || | ||||||||| |||||||||| Sbjct 80800 CCATATCTGCTGATCTTTGATACATTTGACAAGATAGTTCTCCATCACATACATAAAATT 80741 Query 101877 GACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 | | ||||||||| ||||| ||||||| || | ||||||| Sbjct 80740 GTGCAAGGCAATGACAAGGTGGCAATGCCATTTTTGGTAAATCTGAAA 80693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360582801063314