Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2770 100 2e-16 >seq2770 Length=41231 Score = 100 bits (110), Expect = 2e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| ||| | |||||||| || || ||||||||||| ||| |||||| Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || ||| | | || |||| ||||||| ||||| ||||| | || ||||| Sbjct 19434 TGACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 19493 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTAC 29138 || || | |||||||| || |||||||| |||||| || | |||| | || || Sbjct 19494 GCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTAT--CAGACTAT 19551 Query 29139 AATATTCAGAAGGAATCTACTCTTCA 29164 |||||||| || |||||||| ||||| Sbjct 19552 AATATTCAAAAAGAATCTACCCTTCA 19577 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||| || | ||| |||||||| | ||||||||||| || || || |||||| Sbjct 22506 GATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAA 22565 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || ||| || | ||||| || || || |||||||||||||| || |||| || Sbjct 22566 GATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTTGGTTTTG 22625 Query 29175 CGATTACGAGGAGG 29188 ||| | || || || Sbjct 22626 CGACTTCGTGGTGG 22639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | || |||||||| ||||| || ||||| || || || || ||| Sbjct 20380 GATAAAGAAGGTATTCCTCCTGATCAACAGAGACTCATTTTTGCTGGTAAGCAGCTAGAA 20439 Query 29115 GAT--TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGT 29172 ||| || | ||||| | ||||| || ||||| || |||||||| |||||| | || | Sbjct 20440 GATGGTCGCACACTAT--CAGATTATAACATTCAAAAAGAATCTACACTTCACCTTGTAT 20497 Query 29173 TACGATTACGAGGAGG 29188 || |||| |||| || Sbjct 20498 TAAGATTGAGAGGTGG 20513 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| ||||||||||| | || |||||||| ||| | || ||||| || || Sbjct 20143 AAAATTCAAGATAAAGAAGGAATCCCACCTGATCAACAGAGATTGATATTTGCTGGTAAG 20202 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| |||||| | ||| || | || ||||| ||||| |||||||||||||||||| Sbjct 20203 CAACTAGAAGATGGCCGTACTCTGTCTGACTACAACATTCAAAAGGAATCTACTCTTCAC 20262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 29045 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 29104 ||||||| || ||||| || | || |||||| || || ||||| ||||| || || Sbjct 21395 AAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAA 21454 Query 29105 ACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 |||||| || ||| | ||| | | ||||||||||| || || |||||||||||||| Sbjct 21455 ACAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTCA 21514 Query 29165 CATGGTGTTACGATTACGAGGAGG 29188 ||||| | || | ||||||| Sbjct 21515 TCTGGTGCTTAGACTTAGAGGAGG 21538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427543478544170