Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq2770 96.9 3e-15 >seq2770 Length=41231 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| ||| | |||||||| || || ||||||||||| ||| |||||| Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || ||| | | || | || ||||||| ||||| ||||| | || ||||| Sbjct 19434 TGACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 19493 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211 || || | |||||||| || |||||| | |||||| || | |||| | || || Sbjct 19494 GCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTAT--CAGACTAT 19551 Query 25212 AATATTCAAAAGGAATCTACTCTTCA 25237 ||||||||||| |||||||| ||||| Sbjct 19552 AATATTCAAAAAGAATCTACCCTTCA 19577 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 |||||||| || | ||| |||||||| | ||||||||||| || || || ||||| Sbjct 22506 GATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAA 22565 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| || ||| || | ||||| || || ||||||||||||||||| || |||| || Sbjct 22566 GATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTTGGTTTTG 22625 Query 25248 CGATTACGAGGAGG 25261 ||| | || || || Sbjct 22626 CGACTTCGTGGTGG 22639 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| | || || || |||||||| || |||||| Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| || ||| |||||||||||| | || |||||| Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || ||||| || ||||| || || || | |||||| || | ||||| | ||||| | Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTAT--CAGATTATA 20464 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | |||||||| |||||||| |||||| | || ||| |||| |||| || Sbjct 20465 ACATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGG 20513 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 25119 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 25178 |||||| ||||||||||| | || |||||||| ||| | || ||||| || || Sbjct 20143 AAAATTCAAGATAAAGAAGGAATCCCACCTGATCAACAGAGATTGATATTTGCTGGTAAG 20202 Query 25179 CAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238 ||| | |||||| | ||| || | || ||||| |||||||||||||||||||||||| Sbjct 20203 CAACTAGAAGATGGCCGTACTCTGTCTGACTACAACATTCAAAAGGAATCTACTCTTCAC 20262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 25118 AAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAA 25177 ||||||| || ||||| || | || |||||| || || ||||| ||||| || || Sbjct 21395 AAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAA 21454 Query 25178 ACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 |||| | || ||| | ||| | | ||||||||||| ||||| |||||||||||||| Sbjct 21455 ACAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTCA 21514 Query 25238 CATGGTGTTACGATTACGAGGAGG 25261 ||||| | || | ||||||| Sbjct 21515 TCTGGTGCTTAGACTTAGAGGAGG 21538 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||||||| | ||||| || || || ||||| || || ||| ||||| Sbjct 20515 ATGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGT 20574 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || | || |||||| ||||||||||| | || |||||| Sbjct 20575 GATACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAG 20634 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | ||||||||||| || || ||||| |||||| || ||| | | || || || Sbjct 20635 CAACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTATAAC 20694 Query 25215 ATTCAAAAGGAATCTACT 25232 || ||||| ||||| ||| Sbjct 20695 ATCCAAAAAGAATCAACT 20712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410036730152996