Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2770 176 7e-39 seq2028 114 2e-20 seq12692 91.5 2e-13 seq13140 89.7 8e-13 >seq2770 Length=41231 Score = 176 bits (194), Expect = 7e-39 Identities = 177/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||||||||| || || ||||| ||||| ||||| |||| | | | Sbjct 19603 ATGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGT 19662 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| ||||| |||||||||||||||||||| ||||| |||||||| Sbjct 19663 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAG 19722 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| || ||||| |||| ||| | || || | ||| ||||| Sbjct 19723 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAAC 19782 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || |||| |||||||| | ||| |||| || || Sbjct 19783 ATTCAAAAAGAATCTACACTGCACTTGGTTTTGAGGTTAAGAGGAGGAAT 19832 Score = 174 bits (192), Expect = 2e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| ||||||| | || || ||||| |||||| ||||| |||| | | | Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||| |||||||||||||||||||| || || |||||||| Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAG 20862 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | |||||||||||||||||||| | || ||| | |||||||| ||| |||||| Sbjct 20863 CAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAAT 20922 Query 124719 ATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| ||||| ||| ||||| Sbjct 20923 ATTCAAAAGGAATCCACTCTGCAT 20946 Score = 172 bits (190), Expect = 8e-38 Identities = 204/273 (75%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | || || |||| || ||||| |||||| | || | ||| ||| | Sbjct 20515 ATGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGT 20574 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | ||| |||||||||||||||||||| || || || ||||| Sbjct 20575 GATACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAG 20634 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || || |||||||| ||| | | || ||| ||| ||||| Sbjct 20635 CAACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTATAAC 20694 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 || ||||||||||||||||| ||||| ||||| | | || |||||||| ||| |||| Sbjct 20695 ATCCAAAAAGAATCAACTTTACATTTAGTTTTGAGGCTTCGTGGTGGTATGCAAATATTC 20754 Query 124778 ATAAAAA--TTGA-TTGTAAATAAATATCACTA 124807 |||| | |||| | ||||| |||| | ||| Sbjct 20755 GTAAAGACCTTGACTGGTAAAACAATAACTCTA 20787 Score = 158 bits (174), Expect = 2e-33 Identities = 184/247 (74%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || || || || || | ||| | ||| ||| | Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | ||| || |||||||||||||||||||| || ||||||||| Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || |||||||| || || || |||| ||| |||| ||| || ||||||||| Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAAC 20466 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777 |||||||||||||| || | || | || ||| | || |||||||||| ||| |||| Sbjct 20467 ATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGGTATGCAAATATTC 20526 Query 124778 ATAAAAA 124784 | |||| Sbjct 20527 GTTAAAA 20533 Score = 158 bits (174), Expect = 2e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || ||||| ||||| |||| |||| | | | Sbjct 20971 ATGCAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGT 21030 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| |||| || ||||||||||||||||| || |||||||||||| Sbjct 21031 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAA 21090 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || |||||||||||||| |||| ||| ||||||| | || || ||| Sbjct 21091 CAGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAAT 21150 Query 124719 ATTCAAAAAGAATCAAC 124735 || |||||||||||||| Sbjct 21151 ATCCAAAAAGAATCAAC 21167 Score = 156 bits (172), Expect = 6e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | |||||| |||| || |||||||| || |||| | || | | Sbjct 19830 AATGCAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAG 19889 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| ||| | ||| ||||||||||| |||||||| || ||||| ||||| Sbjct 19890 TGATACAATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCAGATCA 19949 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||| | |||||||| || || || | || ||| |||| |||||| || || || Sbjct 19950 ACAGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACATTATCTGACTACAA 20009 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| ||||||||| | || || || | |||| ||||| Sbjct 20010 CATTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACTGAGAGGAGGTAT 20060 Score = 149 bits (164), Expect = 9e-31 Identities = 144/185 (78%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 124563 ACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAG 124622 ||||| || ||||| ||| |||| |||| | | |||||| || ||| | || Sbjct 21336 ACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAAGGCA 21395 Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 ||||||||||| ||||| || || ||||| ||||| || |||||||||||||| || ||| Sbjct 21396 AAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAAA 21455 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| |||||||| || |||||||| |||||| ||||| ||||||||||| ||| | ||| Sbjct 21456 CAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTCAT 21515 Query 124743 TTGGT 124747 |||| Sbjct 21516 CTGGT 21520 Score = 141 bits (156), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || | || ||| |||| || ||||| || || |||| | ||| | | Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||| || || ||| ||||| || |||||||||||||| ||||| || || || |||| Sbjct 19434 TGACACGATAGAAAATGTTAAAGCA-AAAATTCAAGATAAGGAAGGAATTCCTCCCGATC 19492 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||| | || |||||||| |||||| | || ||| |||| || || ||| |||| Sbjct 19493 AGCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATA 19552 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||||| || | ||| | || | | ||| |||||||||| Sbjct 19553 ATATTCAAAAAGAATCTACCCTTCATCTTGTACTTAGGTTAAGAGGTGGTAT 19604 Score = 140 bits (154), Expect = 5e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || |||| |||||||| |||||| |||| ||||| || | Sbjct 19147 ATGCAGATTTTCGTTAAAACCTTAACTGGCAAAACAATAACTCTAGAAGTTGAACAAAGT 19206 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| ||||||||||| || |||||||| |||||||||||| Sbjct 19207 GACACCATCGAGAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 19266 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || || ||| | |||||| | || || | |||||| ||| Sbjct 19267 CAACGTTTAATTTTTGCTGGTAAGCAACTTGAGGATGGACGTACTCTTTCAGATTACAAT 19326 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||||||||| | ||||| ||| | | || ||||||| || Sbjct 19327 ATTCAGAAAGAATCAACCCTTCATTTAGTTCTCAGGCTAAGAGGTGGAAT 19376 Score = 132 bits (146), Expect = 7e-26 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 124565 AGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAA 124624 ||| |||||||| ||| |||| ||||| | | |||||| ||| ||| ||||| || Sbjct 22439 AGGTAAAACTATTACTCTAGAAGTTGAACCCAGTGATACCATTGAGAATGTAAAAGCAAA 22498 Query 124625 AATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACA 124684 || || |||||||| || || || ||||||||||| | ||||| ||||| || || || Sbjct 22499 GATCCAGGATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCA 22558 Query 124685 ATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTT 124744 | || ||| | |||| || ||||||||| || ||||| ||||| ||| ||||||| Sbjct 22559 GCTGGAAGATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTT 22618 Query 124745 GGTTTTACGTTTACGAGGTGG 124765 |||||| || | || ||||| Sbjct 22619 GGTTTTGCGACTTCGTGGTGG 22639 Score = 127 bits (140), Expect = 3e-24 Identities = 170/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 |||||||| || ||| | || ||||| || ||||| || || || ||||| |||| | Sbjct 18916 ACAATGCAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGAGCCT 18975 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 | ||| || || ||| | || |||||||| ||||||||||| || || ||||| Sbjct 18976 AGTGACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCTGAC 19035 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || || ||||| |||||||| || || ||| | || ||| | || ||||| ||| ||| Sbjct 19036 CAGCAGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCAGACTAT 19095 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTT-TTACGTTTACGAGGTGGTAT 124768 || || || |||||||| || | || |||||| ||| | | | ||||||| || Sbjct 19096 AACATCCAGAAAGAATCGACACTACACTTGGTTCTTAGGCTGA-GAGGTGGCAT 19148 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| ||||||| || || || || || ||||| |||| ||||| | | Sbjct 20059 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC 20118 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| || |||| |||||||||||||||||||| || |||||||||||| Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAA 20178 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| || || ||| |||| ||| | || || | || || || Sbjct 20179 CAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAAC 20238 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| ||| | || | ||| | || | || |||||||| Sbjct 20239 ATTCAAAAGGAATCTACTCTTCACCTAGTTCTCCGGCTTCGTGGTGGTAT 20288 >seq2028 Length=121951 Score = 114 bits (126), Expect = 2e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712 |||||| | ||| || || || |||| | |||||||||||| ||||| ||| | ||| Sbjct 76388 AGGTTTCTCTTTAATAAGATCAATTATATATTTTAATTGATCAACTCCTTCATTAGAATA 76329 Query 205713 ATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGG 205772 || | || |||||| | ||||| |||||||||||| ||||||||||| |||||||| || Sbjct 76328 ATCTTTACTCATATCTACATATTCAGCACCAAAATGTCGCCATTGAAAGCCATAAACAGG 76269 Query 205773 ACCTAAATCACCT 205785 ||| | ||| ||| Sbjct 76268 ACCAAGATCTCCT 76256 >seq12692 Length=15378 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 202719 TCTAATTGTTATTTTTATAATATTTTTTAATAAATAAATCAACATCAAATTTACGTCTAC 202778 |||| ||||| | | |||| | || |||| ||| || ||||||||||| | | || Sbjct 3450 TCTATTTGTTTTCTCTATA---TCTTCTAATGAATTCATTTACATCAAATTTTCTTTGAC 3506 Query 202779 ATCCTTCATAACTCATATATCTAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTAT 202838 | |||| ||| |||| || | ||||| ||||| | || | |||| |||| || || Sbjct 3507 AACCTTTGTAATTCATGTAACGGATTTTTCCAAACACTGCACGTTCTGCCCATCCTTGAT 3566 Query 202839 CATGAATACCACAAATTGACCACATACATCC 202869 |||| || |||||||||||||||||||| || Sbjct 3567 CATGTATTCCACAAATTGACCACATACAACC 3597 >seq13140 Length=15713 Score = 89.7 bits (98), Expect = 8e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 124640 AGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCG 124699 ||| || |||||||||||||| | | |||||||| || || ||||| || ||| | | Sbjct 15482 AGGCATTCCACCTGATCAACAGCGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGAAG 15423 Query 124700 AACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 ||||||| || || |||||||| |||||||| || || ||||| ||| | ||||| Sbjct 15422 AACATTATCTGACTACAATATTCAGAAAGAATCTACATTACATTTAGTTCTTCGTTT 15366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754022390035200