Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2770 158 1e-33 >seq2770 Length=41231 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | ||| ||||| |||||||| | |||||| |||||||||||||| || || Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || ||| ||| || |||||||| ||||| | |||||||| |||||||| |||||| Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| || || ||| ||||||| ||| || | ||| | ||||| || ||| ||| Sbjct 19709 ATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAACC 19650 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||| || || || || |||||||| |||||||| Sbjct 19649 TCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 122 bits (134), Expect = 8e-23 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||| || || | ||| | |||||| |||||||||||||| ||||| Sbjct 20515 TACCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATC-- 20458 Query 118570 TCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | |||||| ||| ||| || ||||| || ||||| | ||||| | ||| ||||| || Sbjct 20457 TGATAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGG 20398 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCT 118686 ||| || || || || ||| ||| || ||| || | ||| | ||||| | || | | Sbjct 20397 AGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGT-T 20339 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| | || | || || || || |||||||| |||||||||||||| Sbjct 20338 CCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || ||||| ||||| |||||||| | ||| || |||||| || || || ||| Sbjct 19343 GTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTCAAGTTGCTTACCA 19284 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | ||| || ||||| || || || || ||||||||| |||||| |||| Sbjct 19283 GCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTAGCTTTA 19224 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | || || || | || | |||||||| || | ||| Sbjct 19223 ACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTTTGCCAGTTAAGGTT 19164 Query 118722 TTTACAAAAATCTGCATG 118739 || || |||||||||||| Sbjct 19163 TTAACGAAAATCTGCATG 19146 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| ||||||||||| || || || | |||||| ||| || || ||||| || Sbjct 19571 GTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCTTCAAGTTGTTTACCT 19512 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | | ||||||||||||||| || || ||||| ||| ||||||| |||| Sbjct 19511 GCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCTTGAATTTTTGCTTTA 19452 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||| | ||||| || || || || | || | ||||| || || | ||| Sbjct 19451 ACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGTT 19392 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 19391 TTAACGAAGATTTGCAT 19375 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-G 118568 ||||||| | | || ||| || | || | ||||| ||||| ||||||||||| || | Sbjct 20059 TACCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAG 20000 Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628 | || || || ||| || ||||| || ||||| | || | | ||| ||||| || Sbjct 19999 ATAAT-GTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGT 19941 Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || || || || |||||| |||||| |||||| | ||| | || || | ||| Sbjct 19940 GGAATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCT 19881 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | ||||| || || | || || |||||||||||||| Sbjct 19880 ACTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433027712623288