Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq12692 104 4e-17 seq7048 96.9 6e-15 seq69718 84.2 4e-11 >seq12692 Length=15378 Score = 104 bits (114), Expect = 4e-17 Identities = 120/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 189470 CAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATA 189529 || ||||| | |||||| ||||||||| | ||| |||| ||||||||||| ||||| ||| Sbjct 4977 CAAATGGTCAAAGAAGGGAAAATGCATGGATTTCTACGTATGTATTGGGCAAAGAAAATA 4918 Query 189530 CTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTGAACAACAA 189588 ||||||||||||| | |||||||| || || ||| | | ||| ||| | || | || Sbjct 4917 CTTGAATGGACTAACAGTCCTGAAGAGGCATTGGAGAT-TGCTATTTATCTCAATGATAA 4859 Query 189589 GTACGAACTAGACGGCACGGATCCTAACGGATACGTAGG 189627 || ||| | || || || |||||||| || ||||| Sbjct 4858 ATATGAATTGGATGGTCGTGACCCTAACGGTTATGTAGG 4820 >seq7048 Length=18638 Score = 96.9 bits (106), Expect = 6e-15 Identities = 133/184 (72%), Gaps = 3/184 (2%) Strand=Plus/Plus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 |||||| | ||||||||||| ||| ||| | || ||| | |||| | ||||| | Sbjct 622 GATAGCAAAAGCATTATGGTGGTATTATTTTTCAAAACTCTTGGAATTTTGTGATACATT 681 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 ||||| || | | ||||| |||||| ||| ||||| ||| |||||||||||| Sbjct 682 CTTTTTTATTTTGCGTAAAAAGAATAATCAACTTACCTTTCTCCACATATATCATCATTC 741 Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGG-TCAGG--CATT 52061 |||||||||| ||| | ||||| ||| | |||||| | |||| || ||||| ||| Sbjct 742 TACTATGTTTGGTCTTTGGTGGATTGGTGTGAAATGGGTACCTGGTGGATCAGGTAAATT 801 Query 52062 TTTT 52065 |||| Sbjct 802 TTTT 805 >seq69718 Length=2447 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/125 (75%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 188849 GTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTGATAAAGAAGAATACGGTGCA 188908 ||||| ||||||||||| || ||||||||| || || |||||| ||||||| ||||| Sbjct 2271 GTAGATGCTCATAATATTGTTCCTTGTTGGATTGCATCAGATAAACAAGAATATGGTGCC 2212 Query 188909 CGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAATT---TCCT 188965 |||| | |||||||| || ||| ||| | | |||| | ||||| |||| ||| Sbjct 2211 AGAACAATCAGAAAAAAAATTCATGACAAACTTAAAGAATTTTTGACACAATTCCCACCT 2152 Query 188966 GTTGT 188970 ||||| Sbjct 2151 GTTGT 2147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921444872512560