Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2770 118 1e-21 seq87018 116 4e-21 seq24654 111 2e-19 seq106930 109 6e-19 seq110060 107 2e-18 seq13973 107 2e-18 seq13897 107 2e-18 seq23639 105 8e-18 seq302 105 8e-18 seq17096 104 3e-17 seq7170 104 3e-17 seq1209 104 3e-17 seq780 95.1 1e-14 seq3042 93.3 5e-14 seq88662 89.7 6e-13 >seq2770 Length=41231 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||||||| | ||| ||||| |||| ||| || |||||||| || || || | Sbjct 19830 TCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGA 19771 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || ||| | || |||||||| |||||||| || ||||| || ||||| || | || Sbjct 19770 AAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGG 19711 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || || || || ||| |||||| ||| | | | | ||||| || || || | Sbjct 19710 TATGCCTTCTTTATCT-TGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | || || ||||| || || || |||||||||||||| ||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| ||||| |||| |||||| || | || ||||| ||||||||||| ||| Sbjct 20249 TCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAT 20190 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || | || ||| || || | || | | || ||| | ||| |||| | || | | Sbjct 20189 ATCAATCTCTGTTGATCAGGTGGGATTC-CTTCTTTATCTTGAATTTTAGCCTTTACGTT 20131 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| | ||| || || | || || || || || || || |||||||| Sbjct 20130 TTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTTTAC 20071 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 20070 AAAGATTTGCAT 20059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || ||||||||||| || || | ||||| || | || || || || ||||| || || Sbjct 19565 TCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAG 19506 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | | |||||| |||| || | | ||||| || ||| |||||| || | | | Sbjct 19505 ATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCT-TGAATTTTTGCTTTAACATT 19447 Query 43113 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || | ||| || || | ||| |||||||| || |||| || || || Sbjct 19446 TTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGTTTTAAC 19387 Query 43172 AAAGATTTGCATT 43184 |||||||||||| Sbjct 19386 GAAGATTTGCATT 19374 >seq87018 Length=3116 Score = 116 bits (128), Expect = 4e-21 Identities = 86/98 (88%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 60043 AATTAACGTT-TATGAAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGC 60099 |||||||||| || |||||| | ||||| |||| ||||||||||||| |||||||||| Sbjct 772 AATTAACGTTATAAGAAAAAATAGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGC 713 Query 60100 GTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 ||||||||||| ||||| ||||||||||||||||||| Sbjct 712 GTGACAGGCGGGGATACTTACCACTATACTACCGAGGA 675 >seq24654 Length=27924 Score = 111 bits (122), Expect = 2e-19 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 60052 TTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111 ||| |||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 12313 TTAAGAAAAAAGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 12254 Query 60112 CATACTCACCACTATACTACCGAGGA 60137 ||||| ||||||||||||||||||| Sbjct 12253 GATACTTACCACTATACTACCGAGGA 12228 Score = 107 bits (118), Expect = 2e-18 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 60057 AAAAATTT--TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| || Sbjct 21456 AAAAATATGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 21397 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| ||||||||||||||||||| Sbjct 21396 ACTTACCACTATACTACCGAGGA 21374 >seq106930 Length=3113 Score = 109 bits (120), Expect = 6e-19 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATTT-TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 9 AAAAATTGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 68 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 69 CTTACCACTATACTACCGAGGA 90 >seq110060 Length=2164 Score = 107 bits (118), Expect = 2e-18 Identities = 85/100 (85%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 60043 AATTAACGTT-TATGAAAAATTTT---CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCG 60098 ||||||| || || |||||| || |||| |||| ||||||||||||| ||||||||| Sbjct 1925 AATTAACTTTATAAGAAAAAAATTGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCG 1866 Query 60099 CGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138 |||||||||||| ||||| ||||||||| |||||||||| Sbjct 1865 CGTGACAGGCGGGGATACTTACCACTATATTACCGAGGAT 1826 >seq13973 Length=10150 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 9629 AAAACATCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9688 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 9689 TTACCACTATACTACCGAGGAT 9710 >seq13897 Length=14253 Score = 107 bits (118), Expect = 2e-18 Identities = 73/81 (90%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 4554 AAAAATT--CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4611 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 4612 TTACCACTATACTACCGAGGA 4632 >seq23639 Length=9982 Score = 105 bits (116), Expect = 8e-18 Identities = 74/83 (89%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| | | ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 5893 AAAAATGTACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 5834 Query 60116 CTCACCACTATACTACCGAGGAT 60138 || |||||||||||||||||||| Sbjct 5833 CTTACCACTATACTACCGAGGAT 5811 >seq302 Length=194071 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 185829 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 185888 Query 60125 ATACTACCGAGGA 60137 ||||||||||||| Sbjct 185889 ATACTACCGAGGA 185901 >seq17096 Length=34778 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 11221 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 11162 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 11161 TACTACCGAGGA 11150 >seq7170 Length=19467 Score = 104 bits (114), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||| || || ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 11801 AAAAGTTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 11860 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 11861 CTGACCACTATACTACCGAGGA 11882 >seq1209 Length=65799 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| ||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 50224 AAAACATCTCTCCCTGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50165 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 50164 TTACCACTATACTACCGAGGAT 50143 >seq780 Length=63505 Score = 95.1 bits (104), Expect = 1e-14 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 60077 GGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGG 60136 |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 31819 GGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGG 31878 Query 60137 AT 60138 || Sbjct 31879 AT 31880 >seq3042 Length=24224 Score = 93.3 bits (102), Expect = 5e-14 Identities = 71/83 (86%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct 14036 CTCCCCGGAGGGGAATCGAACCGCGGTCTCCCGTGTGACAGGCGGGGATACTTACCACTA 13977 Query 60126 TACTACCGAGGA--TTGAATATA 60146 |||||||||||| ||||| ||| Sbjct 13976 TACTACCGAGGACTTTGAAAATA 13954 >seq88662 Length=2700 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/83 (84%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| ||||||||||||| |||||| || ||||||||||| ||||| ||||||| Sbjct 2525 CTCCCCGGAGGGGAATCGAACCCCGGTCTCTCGTGTGACAGGCGGGGATACTTACCACTA 2466 Query 60126 TACTACCGAGG--ATTGAATATA 60146 ||||||||||| ||||| ||| Sbjct 2465 TACTACCGAGGGCTTTGAAAATA 2443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570732476035920