Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq8063 147 2e-30 >seq8063 Length=21912 Score = 147 bits (162), Expect = 2e-30 Identities = 152/197 (77%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 16622 AAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC--AAGTATGTGTTTAATAA 16679 || ||||| || || |||||||| || ||||||||||| || || |||| | | |||| Sbjct 13765 AAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGAT--ATAA 13822 Query 16680 AAtttttttCGTTATCTGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCT 16739 ||| |||||| | | | | |||| ||||||| |||||||| |||||||| || | Sbjct 13823 AATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTT 13882 Query 16740 CTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAA 16799 |||| ||||||||||||||||| | || ||||||||||| | ||| || |||| ||| Sbjct 13883 CTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACT 13942 Query 16800 CAATAGGAAACACAACA 16816 |||| ||||| |||||| Sbjct 13943 CAATTGGAAATACAACA 13959 Score = 134 bits (148), Expect = 1e-26 Identities = 168/225 (75%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 16257 CTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTT 16316 |||| |||||||||||||| || || ||||||||||| ||||| || |||| ||| | Sbjct 10432 CTTCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCT 10491 Query 16317 TAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATG 16376 | | |||||| |||| ||||| |||||||| || ||||| ||||||||||| ||||||| Sbjct 10492 TCAACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATG 10551 Query 16377 CAACCAATCGCTCACCGTACGTTCTAtttttactttct-atccattttttagcccaattt 16435 |||| | |||||| || | | |||| | | || ||||| ||| ||||| | | Sbjct 10552 CAACTACTCGCTCTCCAAAAGAAGCATTTGT-GTGACTGATCCAATTTAAGGCCCAGTCT 10610 Query 16436 gctttttgtttAACAC-AGTTCATGTTCTCTATTGCATTAAATAA 16479 ||||| ||||||| || | ||| || || ||||| ||||| Sbjct 10611 GCTTTCCTCTTAACACAAGGTAGAGTT-TCAATAGCATTGAATAA 10654 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 16040 TTATCGCATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATT 16099 || || ||||||||||| | ||||||||| || || |||||||||||||| ||||||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAATAATCTGTCTGCAACAAATTCTATATATTGTTTCATT 9032 Query 16100 AAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCT 16159 || ||| ||||||||| ||||| || || | |||||||| || || | || ||| Sbjct 9033 AATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTCA 9092 Query 16160 ATATTAACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTT----AA 16215 ||| || || ||| | ||||| | ||| || || ||| | | |||||| | Sbjct 9093 ATAGCCACTGCATCAGTAATTAT---TTGTACAACTCT-TTTTTCTGTGGGTTTATTAAC 9148 Query 16216 TAAGTGTTTAAACATTATACAAGCAAAATCACAATG 16251 |||||| ||||||| | || |||||||||||||| Sbjct 9149 TAAGTGGCTAAACATGAGGCATGCAAAATCACAATG 9184 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || || ||||| ||||| | ||||||||||| ||||| | ||| || |||||||| || Sbjct 13324 ATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGCTATTTGG 13383 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC 16602 || |||||||||||||| ||||| | || ||| ||||| Sbjct 13384 AATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTC 13421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461634302540400