Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq21197 141 1e-28 seq12781 129 8e-25 seq12719 95.1 2e-14 seq46691 91.5 2e-13 seq10263 91.5 2e-13 >seq21197 Length=10673 Score = 141 bits (156), Expect = 1e-28 Identities = 265/384 (69%), Gaps = 4/384 (1%) Strand=Plus/Minus Query 1042 ATAAATTAAACATCTCGTTTTTCATCATTTATTGTTTCCATCGCTTTAATTAATTCTTCT 1101 ||||| || | ||| ||| ||||||| ||| | | ||| |||| ||||| || ||| Sbjct 6020 ATAAACTAGAGGTCTTATTTATCATCATATATGATGTTCATTACTTTTATTAACTCATCT 5961 Query 1102 TCATTTATTTTTGAATTA-CTAATTGAAACTTTACACAAATTAAATACAACACCTTTTTG 1160 ||||| | | | | |||| |||| || || ||||||| || || ||||||| Sbjct 5960 TCATTAACAGTCAACCCATCTAAC-GAAATCTTGCATGAATTAAAGACGACTCCTTTTTT 5902 Query 1161 TTTTAACTCATCTTTTACTCTAACATACAGTGTCTTTGAATTTGGGTGACAGGTTAAATC 1220 || || |||||||| ||||| || || ||||| ||||| ||||||||||| | || || Sbjct 5901 CTTCAATTCATCTTTAACTCTGACGTAGAGTGTTTTTGAGTTTGGGTGACACGAAAAGTC 5842 Query 1221 TAAAAGAACAGATACTTCATTATATAAAtttttttGCCGTTTAAGTGCACTTCTTGCATT 1280 ||| || | || | || || | | | ||| || | ||||||||| | || || Sbjct 5841 TAATAGGATTGAGATCTCTGTAAAGAGGGATCGTTGACGCTGTAGTGCACTTTTGGCTTT 5782 Query 1281 TATATCTTGAGCCCTTATGGTATAGTATGGATAATAATCATCATTACGTTTAAGAAGAAT 1340 ||||| || || || || |||||||| || || ||||||||| | | ||| ||| || Sbjct 5781 AATATCCTGTGCTCTGATTGTATAGTAGGGGTATGCATCATCATTTCATCTAATAAGGAT 5722 Query 1341 AAAACGTTCTCGTTT-TAAATTTTGTTTAGGTTGAGGTGCTCTATCTTCTACAGCTATTT 1399 || | || ||||| | |||| | |||||| || |||| ||||| ||| || | Sbjct 5721 GAATCTCTCACGTTTCTGGGGTTTG-TCAGGTTGTGGGGCTCGGTCTTCCACAAAGATGT 5663 Query 1400 CAAGTTTGTTTTGGATATTGTCAA 1423 ||| ||| |||||| | |||| Sbjct 5662 CAAACTTGCATTGGATCATTTCAA 5639 >seq12781 Length=13708 Score = 129 bits (142), Expect = 8e-25 Identities = 212/303 (70%), Gaps = 2/303 (1%) Strand=Plus/Plus Query 1042 ATAAATTAAACATCTCGTTTTTCATCATTTATTGTTTCCATCGCTTTAATTAATTCTTCT 1101 ||||| || | ||| ||||||||||| ||| | | ||| |||| ||||| |||||| Sbjct 9693 ATAAACTAGAGGTCTTATTTTTCATCATATATGATGTTCATTACTTTTATTAACTCTTCT 9752 Query 1102 TCATTTATTTTTGAATTA-CTAATTGAAACTTTACACAAATTAAATACAACACCTTTTTG 1160 ||||| | | | | |||| |||| || || ||||||| || || ||||||| Sbjct 9753 TCATTAACAGTCAACCCATCTAAC-GAAATATTGCATGAATTAAAGACGACTCCTTTTTT 9811 Query 1161 TTTTAACTCATCTTTTACTCTAACATACAGTGTCTTTGAATTTGGGTGACAGGTTAAATC 1220 || || |||||||| ||||| || || ||| | ||||| ||||||||||| | | || Sbjct 9812 CTTCAATTCATCTTTAACTCTGACGTAAAGTATTTTTGAGTTTGGGTGACACGAAAGGTC 9871 Query 1221 TAAAAGAACAGATACTTCATTATATAAAtttttttGCCGTTTAAGTGCACTTCTTGCATT 1280 ||| || | ||| | || || | || | ||| || ||||||||| | || || Sbjct 9872 TAATAGGATAGAGATCTCTGTAAAAAAGGATCGTTGACGCCGTAGTGCACTTTTGGCGTT 9931 Query 1281 TATATCTTGAGCCCTTATGGTATAGTATGGATAATAATCATCATTACGTTTAAGAAGAAT 1340 ||||| || || || || |||||||| || || ||||||||| || ||| ||| || Sbjct 9932 AATATCCTGTGCTCTGATTGTATAGTAGGGGTATACATCATCATTTTGTCTAATAAGGAT 9991 Query 1341 AAA 1343 || Sbjct 9992 GAA 9994 >seq12719 Length=14537 Score = 95.1 bits (104), Expect = 2e-14 Identities = 263/403 (65%), Gaps = 34/403 (8%) Strand=Plus/Plus Query 1044 AAATTAAACATCTCGTTTTTCATCATTTATTGTTTCCATCGCTTTAATTAATTCTTCTTC 1103 |||||| | ||| |||||||||||||||| || | ||| ||||| ||||| |||||||| Sbjct 10339 AAATTAGAAGTCTTGTTTTTCATCATTTATGGTGTTCATTGCTTTTATTAACTCTTCTTC 10398 Query 1104 ATTTATTTTTGAATTA-CTAATTGAAACTTTACACAAATTAAATACAACACCTTTTTGTT 1162 ||| || | || | |||| |||| || || ||||||| || ||| |||||| | Sbjct 10399 ATTAATAGTCGACCCATCTAA-CGAAATCTTGCATGAATTAAAGACGACATCTTTTTTCT 10457 Query 1163 TTAACTCATCTTTTAC-TCT-----AACA------------------------TACAGTG 1192 || ||||||| ||| ||| |||| || ||| Sbjct 10458 CCAATTCATCTTCTACATCTCTACAAACATAATCTTTTACTAGATTAAAGGTGTAGAGTC 10517 Query 1193 TCTTTGAATTTGGGTGACAGGTTAAATCTAAAAGAACAGATACTTCATTATATAAAtttt 1252 | ||||| ||||||||||| | | ||||| || | | | | || || ||| | Sbjct 10518 TTTTTGAGTTTGGGTGACATGAAAGGTCTAATAGGATAAAGATCTCTGTAACGAAAGATC 10577 Query 1253 tttGCCGTTTAAGTGCACTTCTTGCATTTATATCTTGAGCCCTTATGGTATAGTATGGAT 1312 ||| || ||||||||| | || || || || || || || || |||||||| || | Sbjct 10578 GTTGATGTCGTAGTGCACTTTTGGCGTTAATGTCCTGTGCTCTGATTGTATAGTAGGGGT 10637 Query 1313 AATAATCATCATTACGTTTAAGAAGAATAAAACGTTCTCGTTT-TAAATTTTGTTTAGGT 1371 | |||||||| ||| ||| ||| || || | || | ||| | ||| | |||| Sbjct 10638 ATACATCATCATCTCGTCTAATAAGGATGAATCTCTCACATTTCTGGGGCTTG-TCAGGT 10696 Query 1372 TGAGGTGCTCTATCTTCTACAGCTATTTCAAGTTTGTTTTGGA 1414 || || |||| ||||| |||| | ||||| ||| ||||| Sbjct 10697 TGTGGGGCTCGGTCTTCCACAGAGACGTCAAGCTTGCATTGGA 10739 >seq46691 Length=5119 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 145197 CTAAATCTTTTTCCTCCACTATTGCATAATTTAGTTGCGTTAAAACATTCTGTGTTCTTG 145256 |||||||| || |||||| || || | |||||| || |||||| || |||| | ||| Sbjct 312 CTAAATCTCTTACCTCCAGATTTACAAAGTTTAGTAGCATTAAAATATCCTGTTTCCTTA 253 Query 145257 TCGACTACGAGCTTAAAATCTCCAAATAACCCATAATAAAAGTTAtttttgattttttCA 145316 || | || | |||||||||||||||| ||||| ||| | ||| ||| |||| || Sbjct 252 TCTATTATCAATTTAAAATCTCCAAATAGTCCATATTAATAACTATCTTTTATTTGCTCG 193 Query 145317 TAACAAACGTCATTTAAT 145334 ||||||| || |||||| Sbjct 192 TAACAAATTTCTTTTAAT 175 >seq10263 Length=32703 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 73928 AAATGGAGATATACTAGTGCTAAATAGACAACCTACTTTACATAAAGCATCAATGATGGC 73987 |||||| || || | || | || |||||||||||||||||||| || ||||||| Sbjct 17015 AAATGGTGACGTAATTGTTTTCAACCGACAACCTACTTTACATAAAATGTCTATGATGGG 16956 Query 73988 TCTTCGAGTTAAAATTATGG-ATGTAAAAACCTTTAAATTTAATCTTGCATGC-ACTAAA 74045 || ||| | | | || || ||| | | |||| | | ||| ||| || || | | Sbjct 16955 TCATCGTATAAGAGTTTTGCCATGGTCCA-CTTTTAGAATGAAT-TTGAGTGTGACCACA 16898 Query 74046 CCATATAATGCAGATTTTGATGGAGATGAAATGAATGCTCATGCGCCTCAATCAGAAGAA 74105 ||||||||||| |||||||||||||||||||||||| |||| || || ||| ||| Sbjct 16897 CCATATAATGCTGATTTTGATGGAGATGAAATGAATCTGCATGTCCCACAGTCATTGGAA 16838 Query 74106 AGTAAAGCTGA 74116 | || |||||| Sbjct 16837 ACTAGAGCTGA 16827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 678524333208480