Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2770 109 4e-19 >seq2770 Length=41231 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 |||||||| | ||||| || |||||||||||||| || ||||| | | || || | Sbjct 19589 CTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCA 19530 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||| | |||||| || ||| |||| | || || ||||| || | ||||||||| Sbjct 19529 TCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTA 19470 Query 18231 TCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||||| |||| || || | | | | ||||||| ||| || ||| | || || Sbjct 19469 TCTTGAATTT-TTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAAT 19411 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 | |||| || || |||||||| || || ||||||||| Sbjct 19410 GGTTTTACCAGTTAATGTTTTAACGAAGATTTGCATT 19374 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | || || | ||||||||||||||||||||| || |||||||| | Sbjct 21198 TCCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGA 21139 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| || |||||| | ||||| || ||| | || || || |||||||| || Sbjct 21138 AAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGG 21079 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| ||| | ||| || | | ||| ||| |||| ||||| Sbjct 21078 AATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAAC 21019 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| |||| || || | || || |||||||||||||| Sbjct 21018 TTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| | ||| | ||||||||| ||||||||||||||||| || || | | ||| || Sbjct 20502 TCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACC 20443 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | || || || ||| | || ||||| |||||||| || | ||||| || Sbjct 20442 ATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTT 20383 Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288 ||| ||| | | || ||||| | | ||| ||||||| || || |||| || | Sbjct 20382 ATCTTGAATCT-TAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAA 20324 Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || || | ||||| |||||||| ||||| Sbjct 20323 TGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || || | |||| ||| ||||| ||||||||||||||||| ||||| | Sbjct 19830 TCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGA 19771 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||| | ||||| || ||| | || || | ||| ||||| || Sbjct 19770 AAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGG 19711 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | |||||| ||||| ||||| |||| || || | | ||| ||||||| || ||| Sbjct 19710 TATGCCTTCTTTATCTTGAATTT-TTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || |||| || || | ||| |||||||| || ||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 87.8 bits (96), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| | |||||||| |||| ||||| || ||||||||||| || ||||| || | Sbjct 21538 CCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGAT 21479 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| ||| ||| || | |||||| || ||| | ||||| || || ||||| || Sbjct 21478 AATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 21419 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTC 18274 | ||| || || || ||||| | ||| || | | | | ||| |||| ||||| Sbjct 21418 ATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTC 21363 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 |||||||||||||| ||||| ||||| | | || | | |||||| ||||| || || Sbjct 20711 GTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATCTTCTAATTGCTTACCA 20652 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TT 18247 ||| ||||||| | ||| ||||| || | ||||| ||||| ||||| | || || Sbjct 20651 GCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATCTTGAATTT-TGGCTTT 20593 Query 18248 GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGT 18307 || | | | | || |||| || || ||||| || || |||| || || || || Sbjct 20592 AACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGTTTTACCAGTTAAAGT 20533 Query 18308 TTTTACAAAAATTTGCAT 18325 ||| || || |||||||| Sbjct 20532 TTTAACGAATATTTGCAT 20515 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || |||||||| |||||||||||||| | | ||| || |||||| | || || || Sbjct 20027 GTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTACGACCATCTTCAAGCTGCTTACCA 19968 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TT 18247 ||| | || | || |||||||| || | ||||| || || ||||| | || || Sbjct 19967 GCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGAATTT-TAGCTTT 19909 Query 18248 GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGT 18307 || | | ||| || |||| ||||| ||| | ||| || |||| || || ||||| Sbjct 19908 AACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGTAATAGTTTTCCCAGTTAATGT 19849 Query 18308 TTTTACAAAAATTTGCATT 18326 || |||||||| |||||| Sbjct 19848 CTTCACAAAAATCTGCATT 19830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378642125165430