Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq8063 188 9e-43 seq139299 102 1e-16 seq9609 95.1 2e-14 seq16555 89.7 6e-13 >seq8063 Length=21912 Score = 188 bits (208), Expect = 9e-43 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| || ||||||||||| ||||||||||| || || | ||| ||||||| Sbjct 13765 AAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAAA 13824 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 34085 | |||||| || | | ||| ||| | ||| ||||| | ||||||||||| ||| |||||| Sbjct 13825 TGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTCT 13884 Query 34086 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 34145 || || |||||||| || || ||||| ||||||||||| | |||||| || || || | Sbjct 13885 TCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTCA 13944 Query 34146 ATTGGGAAAATAACAAATCTATTTGGATT 34174 ||||| || | |||||||||| |||||| Sbjct 13945 ATTGGAAATACAACAAATCTACGTGGATT 13973 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 33387 TTTTTAAATCCCAATTC-AGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCAT 33445 |||| | |||||||||| || ||| ||||| ||||| || |||||||||||| |||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAAT-AATCTGTCTGCAACAAATTCTATATATTGTTTCAT 9031 Query 33446 CATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC 33505 | |||| |||||||| || | ||||| | ||| | || | |||| |||||| Sbjct 9032 TAATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTC 9091 Query 33506 AATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAA 33565 ||| | || |||| || || || | ||| ||| ||| | ||| || | ||| Sbjct 9092 AATAGCCACTGCATCAGTAATTATTTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAA 9151 Query 33566 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33606 || ||||||| | ||||| ||||| || || ||||||| Sbjct 9152 GTGGCTAAACATGAGGCATGCAAAATCACAATGAAGACCCT 9192 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || || ||||| |||||||| || || || || || ||||| || || | || || Sbjct 10434 TCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCTTC 10493 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33725 | |||||| || || || || || || || || || || ||||| ||||||||||| ||| Sbjct 10494 AACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATGCA 10553 Query 33726 ATAAGTCTCTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCC 33782 | | || ||||||| || || ||| | ||||| ||| ||||| || || Sbjct 10554 ACTACTCGCTCTCCAAAAGAAGCATTTGTGTGACTGATCCAATTTAAGGCCCAGTCTGCT 10613 Query 33783 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820 ||| | || |||||||| | ||||| || ||||| || Sbjct 10614 TTCCTCTTAACACAAGGTAGAGTTTCAATAGCATTGAA 10651 Score = 86.0 bits (94), Expect = 8e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 33832 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33891 ||||| | | ||||| | || ||||| || | ||| ||||||||||| ||||| | | Sbjct 13307 TTTCAGTCTTGTCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACAT 13366 Query 33892 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 33951 ||||||| || || || ||||| || || ||||| || || || | ||||||||| || Sbjct 13367 TTTCAATTGCTATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGAC 13426 Query 33952 AAAATCGTTC 33961 ||||| ||| Sbjct 13427 TAAATCTTTC 13436 >seq139299 Length=970 Score = 102 bits (112), Expect = 1e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718 || |||||| | |||||||| || |||||||| || || ||||||||||| || | || Sbjct 85 AGGAGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAA 144 Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778 || ||| || ||||| || | || ||||| ||||||||| || | || | ||| Sbjct 145 ATGGTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCAT 204 Query 63779 TAACATGTGCTGAGGTCTTTCAAC 63802 |||||||||||||| |||||||| Sbjct 205 CAACATGTGCTGAGGCCTTTCAAC 228 >seq9609 Length=20973 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446 ||| || ||||||||||| || ||||| | |||||||| || || ||||| || || | Sbjct 20539 TACCTGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAAT 20598 Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506 || |||||||| || || || |||||||| || ||||| ||||| || || | || | Sbjct 20599 GGATTCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAG 20658 Query 62507 ACTATTTCTAAGACC 62521 ||||| || ||||| Sbjct 20659 GCTATTCCTCAGACC 20673 >seq16555 Length=11409 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280 ||| |||||||| |||||||| | |||| | | || | | ||||||||||| || Sbjct 11221 AGGGCATTCATCAGGACACATAAGACTCCACATTTCATCTTTTTCAACTCGTTTCATGAA 11162 Query 63281 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTG 63339 ||||| |||||||| | || ||| || | |||||||| | || || || ||||||| Sbjct 11161 AAGATCTGGAATCCACAAGGC-ATAGAACAAATCTCTTGCCCGTTGCTCTTCTTTTCCTG 11103 Query 63340 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63399 |||| || || | || || || | | ||||||| |||||| || || || || || | Sbjct 11102 TATTTTTCTTTAATTCAAGAAATTCAAATATATCAGCATGCCAAGGCTCTAAATAAATTG 11043 Query 63400 CCATAACTCCAGG 63412 | | ||||||| Sbjct 11042 CAAATGCTCCAGG 11030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628622410885920