Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq8063 168 6e-37 seq9609 158 1e-33 seq139299 109 5e-19 seq16555 98.7 9e-16 >seq8063 Length=21912 Score = 168 bits (186), Expect = 6e-37 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 12014 AAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAG 12073 ||||| ||||| ||||| |||||||| | |||||||||||||| ||||| |||||| Sbjct 13765 AAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAAA 13824 Query 12074 TATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCT 12133 | |||||| || ||||||| ||||| |||| |||||||| |||||||| |||||| Sbjct 13825 TGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTCT 13884 Query 12134 TCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTA 12193 ||||| ||||||||| || ||| || ||||||||| | ||||||||| || |||| | Sbjct 13885 TCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTCA 13944 Query 12194 ATAGGGAAAATAACGAACCTA 12214 || || || | ||| || ||| Sbjct 13945 ATTGGAAATACAACAAATCTA 13965 Score = 86.0 bits (94), Expect = 6e-12 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 11865 TAAATAAATGCATTT--TTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922 |||||||||| | | |||| | || ||| | | |||||||| |||| | ||||| Sbjct 13290 TAAATAAATGTAGTACCTTTCAGTCTTGTCTTTGATGTATGTATCAATTAGAAGGCTATA 13349 Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTG 11981 |||||| ||||| | |||||| || |||||||| |||||||| || |||| ||| |||| Sbjct 13350 CATTTCAGAATGTACATTTTCAATTGCTATTTGGAATCCATAAAAGCATCTTGCTTCTG 13408 >seq9609 Length=20973 Score = 158 bits (174), Expect = 1e-33 Identities = 122/145 (84%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| ||||||||||| ||||||||||| || || |||||||||||||| |||||| Sbjct 20540 ACCTGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAATG 20599 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||||| |||||| |||| ||||| ||||| |||||||| || | || |||| Sbjct 20600 GATTCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAGG 20659 Query 37258 CTATTTCTCAATCCATGTGTATTAA 37282 ||||| |||| ||||| ||| || Sbjct 20660 CTATTCCTCAGACCATGCCTATAAA 20684 >seq139299 Length=970 Score = 109 bits (120), Expect = 5e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 38410 GGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA 38469 |||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||| || Sbjct 86 GGAGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAAA 145 Query 38470 TTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATT 38529 | || ||||| || || |||| |||||| | ||||| || | |||||| ||||| Sbjct 146 TGGTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCATC 205 Query 38530 AGCATATGTTGTGGTCTTTC 38549 | ||| || || || ||||| Sbjct 206 AACATGTGCTGAGGCCTTTC 225 >seq16555 Length=11409 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 37984 GGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACC 38043 |||||||| ||| ||| |||||||||||| || |||| ||| || | ||| || | | Sbjct 11208 GGACACATAAGACTCCACATTTCATCTTTTTCAACTCGTTTCATGAAAAGATCTGGAATC 11149 Query 38044 CATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAG 38103 || || ||| || |||||| | | | | ||||| || ||| ||| || |||| Sbjct 11148 CACAAGGCATAGAACAAATCTCTTGCCCGTTGCTCTTCTTTTCCTGTATTTTTCTTTAAT 11089 Query 38104 CTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGT 38163 ||||| || ||||||||||| ||||| || |||| |||||| | | |||||| ||| Sbjct 11088 TCAAGAAATTCAAATATATCAGCATGCCAAGGCTCTAAATAAATTGCAAATGCTCCAGGT 11029 Query 38164 CT 38165 || Sbjct 11028 CT 11027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467635692200160