Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2770 154 1e-32 >seq2770 Length=41231 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||| ||||| | ||||| ||||||||||||||||| || Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | ||||| ||||||||||||||| | || |||||||||||||| |||||| Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||||||||| || ||| |||||| ||||| | ||| | |||||| ||| ||| || Sbjct 19709 ATGCCTTCTTTATC-TTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAAC 19651 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | || || || || | || ||||| || || |||||| Sbjct 19650 CTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCATA 19602 Score = 120 bits (132), Expect = 3e-22 Identities = 157/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 ||||||||| || | || || |||||||| |||||||| || | || || || Sbjct 20727 CAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATC 20668 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||| | || ||||||||| |||| |||||||||||||| ||||| || |||||||| || Sbjct 20667 TTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATC 20608 Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730 ||| |||| | |||| | | ||| | || || | || || || |||| || | | Sbjct 20607 T-TGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTG 20549 Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || || || || ||||| ||||||||||||||| Sbjct 20548 TTTTACCAGTTAAAGTTTTAACGAATATTTGCATA 20514 Score = 116 bits (128), Expect = 4e-21 Identities = 158/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA--GT 139610 || || | ||||| ||||| ||||||||||||||||||| || || ||| ||| | Sbjct 20498 AATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAAT--CTGATAGTGTGCGACCAT 20441 Query 139611 CTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 139670 |||| ||||| ||||||||| | || || | || ||||| ||||| || |||||||| | Sbjct 20440 CTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTAT 20381 Query 139671 CGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 | ||| | || | ||| | | ||| | |||||| | || |||||||||| || | Sbjct 20380 C-TTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATG 20322 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | ||||| || || || |||||| Sbjct 20321 GTCTTACCAGTAAGAGTTTTGACAAAAATCTGCATA 20286 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || || |||||||| ||||| || | ||| || ||||| |||||||| || Sbjct 20939 GTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCAAGCTGTTTTCCT 20880 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TT 139686 ||| | || || || |||||||| ||||| ||||||||||| || ||| |||| | || Sbjct 20879 GCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCT-TGAATTTTAGCCTT 20821 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 || | ||| | || || ||||||| ||||| | || | || || || ||||| || Sbjct 20820 TACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTCAAGGT 20761 Query 139747 TTTTACGAATATTTGCATA 139765 |||||||||||||||||| Sbjct 20760 CTTTACGAATATTTGCATA 20742 Score = 107 bits (118), Expect = 2e-18 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG--TCTTCGAGCT 139619 |||| ||||| ||||||||||| ||||| || | || | | ||| ||||| || | Sbjct 19577 TGAAGGGTAGATTCTTTTTGAATATTATAGTC--TGATAGAGTGCGACCATCTTCAAGTT 19520 Query 139620 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTT 139679 ||||||| ||| |||| | | |||||||||||||| || ||||| || || ||| || Sbjct 19519 GTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATC-TTGAATT 19461 Query 139680 TTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCG 139738 |||| |||| | | ||| | ||||| |||| || || || | || | || || || Sbjct 19460 TTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCA 19401 Query 139739 GTCAACGTTTTTACGAATATTTGCAT 139764 || || ||||| ||||| |||||||| Sbjct 19400 GTTAATGTTTTAACGAAGATTTGCAT 19375 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||||||| || || | ||||| || ||||| ||||||||||| || || || Sbjct 22627 CGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCCA 22568 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| ||||||||| |||| ||||| || ||||| || || ||||| ||||| Sbjct 22567 TCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTTA 22508 Query 139670 TCGGTGATTTTTTGTTTTA 139688 || ||| ||| ||||| Sbjct 22507 TCCTGGATCTTTGCTTTTA 22489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614 ||||| ||||| ||||| || ||||||||||| || || || || | ||||| Sbjct 20268 AACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTC 20209 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 || || ||||||||| | |||| | || ||||| || || || |||||||| || | Sbjct 20208 TAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATC-TT 20150 Query 139675 GATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 || |||| | |||| | ||| | |||||| | || || || || | || | |||| Sbjct 20149 GAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCT 20090 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 | || || | || ||||| || ||||||||| || Sbjct 20089 TACCAGTAAGAGTCTTTACAAAGATTTGCATACCT 20055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495122631748800