Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq8063 138 1e-27 >seq8063 Length=21912 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 ||||||||||||| || || |||||||| |||||||||||||| || || | |||| Sbjct 13763 CCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAA 13822 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 | | || |||||| || | ||||| ||| || ||||| ||||| | ||| |||| Sbjct 13823 AATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTT 13882 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | ||||| ||||||||| ||| | |||||||||||||| ||| || |||| || Sbjct 13883 CTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACT 13942 Query 14437 ATATAGGAAAAACTACAAATCT-CGAAGATGTTTCTTTAAGAATTGGTTC 14485 || ||||| || |||||||| || ||| | |||||| || |||||| Sbjct 13943 CAATTGGAAATACAACAAATCTACGTGGATTCTCCTTTAA-AAGTGGTTC 13991 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 ||||| ||||| || | ||| || ||||| | || ||||| | |||| ||| || Sbjct 10434 TCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCTTC 10493 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14015 |||||||| || | ||||| || || || || ||||| || |||||||||||||| || Sbjct 10494 AACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATGCA 10553 Query 14016 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAt 14075 | || ||| |||||||| || || ||| ||| ||||| ||| ||||| || | | Sbjct 10554 ACTACTCGCTCTCCAAAAGAAGCATTTGTGTGACTGATCCAATTTAAGGCCCAGTCTGCT 10613 Query 14076 ttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123 || | |||| | || | |||||||||||||| ||||| | |||| Sbjct 10614 TTCCTCTTAACACAAGGTAGAGTTTCAATAGCATTGAATAATTTTTCC 10661 Score = 100 bits (110), Expect = 3e-16 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 |||||||||||||| || | ||||||||||||||| |||| ||||| || ||||| || Sbjct 13324 ATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGCTATTTGG 13383 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCTTTC 14254 || |||||||||||||| ||||| | ||| ||||| || | ||||||||| Sbjct 13384 AATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGACT-AAATCTTTC 13436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478817632167600