Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq8063 131 2e-25 >seq8063 Length=21912 Score = 131 bits (144), Expect = 2e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 |||| |||||||| ||||| |||||||| |||||||||||||| || || | |||| Sbjct 13763 CCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAA 13822 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 | | || |||||| || | ||||| ||| || ||||| ||||| | ||| |||| Sbjct 13823 AATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTT 13882 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | ||||| ||||||||| ||| | |||||||||||||| ||| || |||| || Sbjct 13883 CTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACT 13942 Query 14225 ATATAGGAAAAACTACAAATCT 14246 || ||||| || |||||||| Sbjct 13943 CAATTGGAAATACAACAAATCT 13964 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743 ||||| ||||| || | ||| || ||||| | || ||||| | |||| ||| || Sbjct 10434 TCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCTTC 10493 Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 13803 |||||||| || | || || || || || || ||||| || |||||||||||||| || Sbjct 10494 AACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATGCA 10553 Query 13804 ATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAt 13863 | || ||| |||||||| || || ||| ||| ||||| ||| ||||| || | | Sbjct 10554 ACTACTCGCTCTCCAAAAGAAGCATTTGTGTGACTGATCCAATTTAAGGCCCAGTCTGCT 10613 Query 13864 ttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCC 13911 || | |||| | || | ||||| || ||||||||||| | |||| Sbjct 10614 TTCCTCTTAACACAAGGTAGAGTTTCAATAGCATTGAATAATTTTTCC 10661 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 |||||||||||||| || | ||||||||||||||| |||| ||||| || ||||| || Sbjct 13324 ATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGCTATTTGG 13383 Query 13990 AAACCATAAAAACATCTAGCTTCTG 14014 || |||||||| ||||| ||||||| Sbjct 13384 AATCCATAAAAGCATCTTGCTTCTG 13408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477680593998960