Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8063 197 2e-45 seq9609 109 7e-19 seq139299 96.9 5e-15 seq16555 89.7 7e-13 >seq8063 Length=21912 Score = 197 bits (218), Expect = 2e-45 Identities = 169/209 (81%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42449 AAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 42508 |||||||| || || ||||| ||||| ||||||||||| || || | ||| ||||||| Sbjct 13765 AAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAAA 13824 Query 42509 TATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 42568 | |||||| || | | ||||||| | ||| ||||| | ||||||||||| ||| |||||| Sbjct 13825 TGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTCT 13884 Query 42569 TCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGA 42628 || || |||||||| || |||||||| ||||||||||| | ||||||||| || || | | Sbjct 13885 TCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTCA 13944 Query 42629 ATTGGGAAAATAACAAATCTATTTGGATT 42657 ||||| || | |||||||||| |||||| Sbjct 13945 ATTGGAAATACAACAAATCTACGTGGATT 13973 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 41870 TTTTTAAATCCCAATTC-AGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCAT 41928 |||| | |||||||||| || ||| ||||| ||||| | |||||||||||| |||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAAT-AATCTGTCTGCAACAAATTCTATATATTGTTTCAT 9031 Query 41929 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC 41988 | |||| |||||||| || | ||||| | ||| | || | |||| |||||| Sbjct 9032 TAATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTC 9091 Query 41989 AATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA 42048 ||||| || || || || || || | ||| ||| ||| | ||| || | ||| Sbjct 9092 AATAGCCACTGCATCAGTAATTATTTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAA 9151 Query 42049 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 42089 || ||||||| | ||||| ||||| || || ||||||| Sbjct 9152 GTGGCTAAACATGAGGCATGCAAAATCACAATGAAGACCCT 9192 Score = 91.5 bits (100), Expect = 2e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 42315 TTTCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374 ||||| | | ||||| | |||||||| || | ||| ||||||||||| ||||| | | Sbjct 13307 TTTCAGTCTTGTCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACAT 13366 Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434 ||||||| || || || ||||| || || ||||| || || || || || |||||| || Sbjct 13367 TTTCAATTGCTATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGAC 13426 Query 42435 AAAATCGTTC 42444 ||||| ||| Sbjct 13427 TAAATCTTTC 13436 >seq9609 Length=20973 Score = 109 bits (120), Expect = 7e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||| |||||||||||||| || ||||| | |||||||| || || ||||| || || | Sbjct 20539 TACCTGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAAT 20598 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 || |||||||| || || || |||||||| || ||||| ||||| || || | || || Sbjct 20599 GGATTCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAG 20658 Query 71262 ACTATTTCTAAGACCATG 71279 ||||| || |||||||| Sbjct 20659 GCTATTCCTCAGACCATG 20676 >seq139299 Length=970 Score = 96.9 bits (106), Expect = 5e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 |||||| | |||||||| || |||||||| || || ||||||||||| |||| || || Sbjct 88 AGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAAATG 147 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 ||| || ||||| || | || ||||| ||| ||||| || | || | ||| || Sbjct 148 GTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCATCAA 207 Query 72537 CATATGCTGAGGTCTTTCAAC 72557 ||| |||||||| |||||||| Sbjct 208 CATGTGCTGAGGCCTTTCAAC 228 >seq16555 Length=11409 Score = 89.7 bits (98), Expect = 7e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||| ||||||| |||||||| | |||| | |||| | | ||||||||||| Sbjct 11223 CCAGGGCATTCATCAGGACACATAAGACTCCACATTTCATCTTTTTCAACTCGTTTCATG 11164 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 || ||||| |||||||| | || ||| || | |||||| | | ||||| || ||||| Sbjct 11163 AAAAGATCTGGAATCCACAAGGC-ATAGAACAAATCTCTTGCCCGTTGCTCTTCTTTTCC 11105 Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152 |||||| || || | || || || | | ||||||| |||||| || || || || || Sbjct 11104 TGTATTTTTCTTTAATTCAAGAAATTCAAATATATCAGCATGCCAAGGCTCTAAATAAAT 11045 Query 72153 GGC 72155 || Sbjct 11044 TGC 11042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669865595918640