Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2770 138 8e-28 >seq2770 Length=41231 Score = 138 bits (152), Expect = 8e-28 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||||| ||||| || || || ||||| |||||||| || ||| | | | ||||| Sbjct 20268 AACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTC 20209 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || ||| || ||||| ||||||| | ||||| || ||| ||||||||||| || Sbjct 20208 TAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTG 20149 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 |||||| |||||| |||| ||||| |||||| ||| || ||||| || || || || Sbjct 20148 AATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTT 20089 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || ||||| |||||||| ||||||||| Sbjct 20088 ACCAGTAAGAGTCTTTACAAAGATTTGCATA 20058 Score = 129 bits (142), Expect = 4e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208 || ||||||||||| | || || |||||||| ||||| || || || | | || | Sbjct 20729 CTCAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCA 20670 Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||||||||| || ||||| | || | |||||| || || ||||| |||||||| Sbjct 20669 TCTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTA 20610 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || ||||||| || ||| ||||||| ||||| || |||||| || | || || Sbjct 20609 TCTTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATT 20550 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| || | |||||| || || ||||||||| Sbjct 20549 GTTTTACCAGTTAAAGTTTTAACGAATATTTGCATA 20514 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| || || | || | ||||||||| || |||||||| || || || || | Sbjct 19601 CCACCTCTTAACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAT 19542 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | |||||| || || | || || | || || ||| ||| Sbjct 19541 AGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGA 19482 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| || || |||||| ||| || ||| ||||||| || || || |||||| Sbjct 19481 ATTCCTTCCTTATCTTGAATTTTTGCT-TTAACATTTTCTATCGTGTCACTGGGTTCTAC 19423 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| |||||||||||||| || | ||||| || || |||||||| Sbjct 19422 TTCTAACGTAATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCAT 19375 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||||||||| || | ||||| || || |||||||| ||||| ||||| | Sbjct 20513 CCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGAT 20454 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||||| || || ||||| | || | | ||||| || ||| Sbjct 20453 AGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGA 20394 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || |||||||| || ||| || ||| || ||| |||| || || || || ||| || Sbjct 20393 ATACCTTCTTTATCTTGAATCTTAGCT-TTGACATTTTCAATTGTGTCACTTGGTTCCAC 20335 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | |||||||| ||||| || |||||||| |||||||| |||||| Sbjct 20334 CTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCATA 20286 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | || | ||||||||||||||| || ||||| || || |||||||| Sbjct 19373 CCACCTCTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAA 19314 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | || || | ||| || ||||| | || ||||||||||| || |||| Sbjct 19313 AGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGA 19254 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| ||||| |||||| ||| || || | || ||||| || || | ||| || Sbjct 19253 ATACCTTCCTTGTCTTGAATTTTAGCT-TTAACGTTCTCGATGGTGTCACTTTGTTCAAC 19195 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| || || ||||| || || | ||||| || ||||| ||||| Sbjct 19194 TTCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || |||||||| || ||||| || || ||| | ||||||| ||| Sbjct 21173 TGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCTTCTAGCTGT 21114 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || || |||| | | ||||| || ||||||||||||||| || ||| || Sbjct 21113 TTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATCTTA 21054 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||||||| |||| || ||||| ||| || || ||||| || |||||||| || || Sbjct 21053 GCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTTTTCCCAGTA 20994 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 ||||| || |||||||||||||| Sbjct 20993 AGAGTCTTAACAAAAATTTGCAT 20971 Score = 114 bits (126), Expect = 9e-21 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||||| || | ||| || || || || || ||||| || ||||| || || Sbjct 19147 TGCCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTC-- 19090 Query 15195 TTAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTT 15252 | | ||| || | ||||| | ||| |||||||| | |||| | || ||||| Sbjct 19089 TGACAATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGG 19030 Query 15253 TGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTC 15312 || ||||||||||| || |||||| ||| ||| |||||||||| || ||| || Sbjct 19029 AGGGATTCCTTCTTTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTC 18970 Query 15313 TACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || ||||| || || || || ||||| ||||| || ||||| Sbjct 18969 AACCTCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 18919 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| || || || | ||| | || || ||||| || |||||||| || | Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGAT 19998 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||| | || || ||||| | || || | ||||| || |||| Sbjct 19997 AATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGA 19938 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| |||||| ||| || ||| |||| || ||||| ||| ||||| Sbjct 19937 ATTCCTTCTTTGTCTTGAATTTTAGCT-TTAACATTTTCAATTGTATCACTAGGCTCTAC 19879 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||||||||| ||||| || || | || || |||||||| ||||| Sbjct 19878 TTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||| ||||| | ||| | || | |||||| || || ||||||||||| |||||||| Sbjct 21540 TGCCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTG 21481 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | || |||| |||||| ||||| | || | | || || || || Sbjct 21480 ATAATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTG 21421 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| || |||||||| |||||| ||| ||| ||||||| ||||| ||| || | Sbjct 21420 GAATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAA 21361 Query 15315 CATCTAAGGTAATGGTTTTACCTGT 15339 | ||||| ||||| || || ||||| Sbjct 21360 CTTCTAAAGTAATAGTCTTTCCTGT 21336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361509084046974