Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq2770 105 6e-18 >seq2770 Length=41231 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||||| | || | ||||| || | ||||| || ||||| ||||||||||| | Sbjct 21538 CCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGAT 21479 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | |||| | | ||||| || |||||||| ||| ||||||| ||||||||||| || Sbjct 21478 AATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 21419 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | |||||||||||| |||||| || || | | | |||||| | |||||| | Sbjct 21418 ATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACT 21359 Query 18995 TCGACGGTAATGGTTTTACCTGTTAA 19020 || | ||||| || || ||||| || Sbjct 21358 TCTAAAGTAATAGTCTTTCCTGTAAA 21333 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 |||| || || |||||||||||||| || || | | |||| || | || || |||||| Sbjct 20945 TGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCAAGCTGT 20886 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || ||| ||||||||| ||||||||| || | ||| ||||| || |||||| Sbjct 20885 TTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGAATTTTA 20826 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 ||||| | | | |||||| | ||||| || | || || |||||||| || Sbjct 20825 GCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTC 20766 Query 19019 AAAGTTTTGACAAAAATTTGCAT 19041 || || || || || |||||||| Sbjct 20765 AAGGTCTTTACGAATATTTGCAT 20743 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| ||||| || | ||| | ||||| || |||||||| || ||||| | Sbjct 20513 CCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGAT 20454 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | || || ||||| ||||| ||| |||| |||||||| ||||| || Sbjct 20453 AGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGA 20394 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || ||||| || ||| || ||| || | | | || || | || ||| Sbjct 20393 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACC 20334 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 20333 TCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413805743672716