Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq2770 105 4e-18 >seq2770 Length=41231 Score = 105 bits (116), Expect = 4e-18 Identities = 166/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192 ||||| || || |||||||||| ||| ||||| |||| ||| || |||||||| || || Sbjct 19839 AATCTGCATTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTT 19780 Query 33193 GTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTG 33252 || || || | | | || || | || || ||| ||| || | ||||||||| Sbjct 19779 ATAGTCTGAAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTG 19720 Query 33253 GTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTT 33312 || | |||||||||||||| || ||| |||||| ||| ||| ||||| | Sbjct 19719 ATCAGGAGGTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACT 19660 Query 33313 GGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | ||| || | ||||| ||||| || ||||| || ||||| || || ||||| Sbjct 19659 GGACTCAACCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||||| || | || ||||| | || || ||||| || ||||||||||| || Sbjct 19373 CCACCTCTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAA 19314 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | | || || || | |||||| ||| ||| ||||||||||| || || | || Sbjct 19313 AGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGA 19254 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || ||||| || || ||| ||| || | | || ||||| | ||| ||| Sbjct 19253 ATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACT 19194 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || |||||||| ||||| || || | ||||| |||||||| |||||| Sbjct 19193 TCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCATG 19146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318187787124972