Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq382 123 1e-23 seq91357 122 5e-23 seq33157 114 7e-21 seq5024 114 7e-21 seq88277 113 2e-20 seq6653 111 8e-20 seq147274 104 1e-17 seq14251 87.8 9e-13 seq131506 84.2 1e-11 seq74931 84.2 1e-11 >seq382 Length=149714 Score = 123 bits (136), Expect = 1e-23 Identities = 85/97 (88%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 11433 ATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTT 11492 ||| | |||| ||||| | |||||||||||| |||||||||| ||||||||||||| Sbjct 48398 ATATATTTAACAAAAACTATAATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTT 48339 Query 11493 ATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||| |||||||||||||||||||| Sbjct 48338 ATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 48302 >seq91357 Length=3127 Score = 122 bits (134), Expect = 5e-23 Identities = 90/103 (87%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 11429 AAATATAGAAT-TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 |||| || ||| ||||||||| | | |||||||||| |||||||||| |||||||| Sbjct 71 AAATTTAAAATCTAATAAAAAGTTCA-TTGGCCCATGGGGGGATCGAACCCACGACCTTC 129 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 130 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 172 >seq33157 Length=12422 Score = 114 bits (126), Expect = 7e-21 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 ||||||| ||| | || |||||||| | | |||||||||| |||||||||||||||| Sbjct 12319 AGAATTATTAATATGACAGATTGGCCCGTAAGGGGATCGAACCCTCGACCTTCGCGTTAT 12378 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||| ||||| Sbjct 12379 TAGCACGACGCTCTAACCAACTGAGCTAACGGGCC 12413 >seq5024 Length=38852 Score = 114 bits (126), Expect = 7e-21 Identities = 80/91 (88%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 31540 TAAAAAATTC--TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGA 31597 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 |||||| ||||||||||||||||||||| || Sbjct 31598 CGCTCTAACCAACTGAGCTAATGGGCCGACG 31628 Score = 104 bits (114), Expect = 1e-17 Identities = 70/78 (90%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGG-ATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||||| || |||||||| ||||||||||||||||||||||||||||| | || Sbjct 33070 TTGGCCCATGGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAATCA 33011 Query 11514 ACTGAGCTAATGGGCCGT 11531 |||||||||||||||||| Sbjct 33010 ACTGAGCTAATGGGCCGT 32993 >seq88277 Length=3137 Score = 113 bits (124), Expect = 2e-20 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 2588 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 2529 Query 11515 CTGAGCTAATGGGCCGTCG 11533 |||||||||||||||| || Sbjct 2528 CTGAGCTAATGGGCCGACG 2510 >seq6653 Length=34123 Score = 111 bits (122), Expect = 8e-20 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| |||||||||||| | |||||||| |||||||||||||||||||||||||| Sbjct 16523 AAAAT--AATTGGCCCATGGGGGAATCGAACCCACGACCTTCGCGTTATTAGCACGACGC 16580 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 16581 TCTAACCAACTGAGCTAATGGGCC 16604 >seq147274 Length=904 Score = 104 bits (114), Expect = 1e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 381 TTGGCCCGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 322 Query 11515 CTGAGCTAATGGGCCG 11530 ||||||||| |||||| Sbjct 321 CTGAGCTAACGGGCCG 306 >seq14251 Length=13433 Score = 87.8 bits (96), Expect = 9e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| |||| ||| ||||| ||||||||||||| |||||| Sbjct 4423 TGGCCCATGAGGGGATCGAACCAACGACTTTCAAGTTATGAGCACGACGCTCTAACCAAC 4482 Query 11516 TGAGCTAATGGG 11527 |||||||| ||| Sbjct 4483 TGAGCTAACGGG 4494 >seq131506 Length=1057 Score = 84.2 bits (92), Expect = 1e-11 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11481 GACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 1 GACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACGGGCCG 50 >seq74931 Length=2389 Score = 84.2 bits (92), Expect = 1e-11 Identities = 70/84 (83%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| |||| ||||||| || ||||| | ||||||| |||||||||||| ||| | Sbjct 2116 AAAAT--AATTTGCCCATGGGTGG-TCGAATCCACGACCTTTGCGTTATTAGCATGACCC 2172 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||||||||| Sbjct 2173 TCTAACCAACTGAGCTAATGGGCC 2196 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261007380319864