Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2770 149 6e-31 >seq2770 Length=41231 Score = 149 bits (164), Expect = 6e-31 Identities = 187/250 (75%), Gaps = 9/250 (4%) Strand=Plus/Minus Query 94764 TTTTAA--AAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| ||| ||| || || |||||||||| || || | ||| | |||||||| | Sbjct 20533 TTTTAACGAATATTTGCATACCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTT 20474 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGAT 94878 |||| | ||||||||| | ||||||| || ||| || ||||| || || |||| || Sbjct 20473 TTTGAATGTTATAATC--TGATAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAAT 20416 Query 94879 TAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCC 94938 | ||| || ||||| ||||||||||||||||| || | ||| || || ||||| | Sbjct 20415 GAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTC 20356 Query 94939 GACAGTGTCAGCGTGGT-CGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997 | |||||| | |||| | || |||| || ||||| || |||||||||||||| |||| Sbjct 20355 AATTGTGTCA-CTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAA 20297 Query 94998 AGATCTGCAT 95007 | |||||||| Sbjct 20296 AAATCTGCAT 20287 Score = 134 bits (148), Expect = 1e-26 Identities = 176/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||||||| || | ||| |||||||||| |||||||| ||||| | Sbjct 19842 AAAAATCTGCATTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAAT 19783 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 |||||| || | | || || | ||| || |||||||| || |||| || | | | Sbjct 19782 GTTATAGTC--TGAAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGT 19725 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 |||||||| ||||| || |||||||| || | ||||||||| || || | | ||| Sbjct 19724 TGCTGATCAGGAGGTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTG 19665 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | || || || | || || ||||| |||||||| || || |||||||||||| Sbjct 19664 TCACTGGACTCAACCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGC 19605 Query 95006 AT 95007 || Sbjct 19604 AT 19603 Score = 120 bits (132), Expect = 3e-22 Identities = 170/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||||| |||||| || | |||||||||||||| || || | ||| | Sbjct 20065 TTTGCATACCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGT 20006 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || ||| ||| || ||| || ||||| || || |||| ||||| || || || Sbjct 20005 AGTCAG--ATAATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTG 19948 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 |||||| ||||| ||||||||||| | |||||| || || || | | || ||| Sbjct 19947 ATCTGGTGGAATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACT 19888 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | || || ||||| ||||| | || |||||||| |||||||| Sbjct 19887 AGGCTCTACTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 111 bits (122), Expect = 1e-19 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||| | || | ||| | |||| ||| ||||||||||| | Sbjct 20982 AAAAATTTGCATGCCACCTCTAAGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAAT 20923 Query 94828 GTTATAATCGCTCATAGTGTT--GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||| || | ||| |||| | ||| || ||||||||||| |||| || | || Sbjct 20922 ATTATAGTC--TGATAATGTTCTGCCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGC 20865 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 |||||||| |||||||| |||||||| || | |||||| ||||| || | | ||| Sbjct 20864 TGCTGATCAGGAGGAATGCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTA 20805 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | | || || || | || || ||||| ||||| | || || || || || ||| Sbjct 20804 TCACTGGGCTCAACCTCTAGAGTTATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGC 20745 Query 95006 AT 95007 || Sbjct 20744 AT 20743 Score = 104 bits (114), Expect = 2e-17 Identities = 165/235 (70%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||||||||| | |||| || | ||| | || ||||| ||||| | || || || Sbjct 21201 CATTCCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTC 21142 Query 94837 GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894 | || ||| || ||| || ||||||||||| |||| || | || || ||||| Sbjct 21141 AG--AAAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCA 21084 Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954 || ||||| |||||||| || | ||| || ||||| || | | ||| ||| | Sbjct 21083 GGTGGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGC 21024 Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || | || |||||||| ||||||||||| || ||||| || ||||||| Sbjct 21023 TCAACTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCATGC 20969 Score = 102 bits (112), Expect = 7e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||||||||||||||| | ||| || || || ||| | ||| || || || Sbjct 20262 GTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTG 20203 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || |||| || ||||| || ||||| || || || |||||||| || | |||||| Sbjct 20202 CTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGAATTTT 20143 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAG 94982 ||||| ||| | | ||||| || || || || || | || || || || |||| Sbjct 20142 AGCCTTTACGTTTTCAATGGTGTC-GCTAGGTTCAACTTCTAATGTTATTGTCTTACCAG 20084 Query 94983 TAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||| || |||||||| ||||| Sbjct 20083 TAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 102 bits (112), Expect = 7e-17 Identities = 116/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | || | ||||| || | ||||||||| ||||| | || ||||| | Sbjct 21538 CCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATC--TG 21481 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| |||| | |||||| || ||||| || |||| || | || ||||||||||| | Sbjct 21480 ATAATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTG 21421 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 |||| || |||||||| | |||||||||||| || Sbjct 21420 GAATGCCCTCTTTGTCTTGAATTTTTGCCTTCAC 21387 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854 ||| || || || ||||| ||||| ||||| | |||||| || | ||| || ||| Sbjct 20727 CAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATC 20668 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 || | || || || ||||||| | | |||||||||||||||||| |||||||| || Sbjct 20667 TTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATC 20608 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGG 94973 | |||||| || || || | | || ||| | ||| || || |||| || || | Sbjct 20607 TTGAATTTTGGCTTTAACATTTTCTATCGTATCA-CTTGGTTCTACTTCAAGAGTTATTG 20549 Query 94974 TTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| | |||||| || || || ||||| Sbjct 20548 TTTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| | | |||||||| | || ||||| || || | |||||| || | Sbjct 19145 CCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTC--TG 19088 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | | ||| | ||| || || || || || |||| || | || ||||| || |||| Sbjct 19087 ACAATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAG 19028 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || |||||||| || | |||||| |||| || | | |||||| | || | Sbjct 19027 GGATTCCTTCTTTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAA 18968 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || |||||||| |||||||||||||||||||| Sbjct 18967 CCTCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCAT 18919 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| || || || || |||| ||||| | ||| ||||| || ||||||||||| || Sbjct 19302 ATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTT 19243 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| || || ||| ||| |||||| || || || || | || || Sbjct 19242 GTCTTGAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTAT 19183 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| ||||| | ||||| || || |||||||||| Sbjct 19182 TGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCATGC 19145 Score = 93.3 bits (102), Expect = 4e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 |||||| ||||| |||| ||||||||||||||| | ||||||||| || || || Sbjct 22628 TCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTTCTGCC 22569 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||||||| || || ||||||| | | || ||||| || ||||| || ||||| Sbjct 22568 ATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCCTCTTT 22509 Query 94912 GTCATAAATTTTTGCCTTGAC 94932 || | || ||||| || || Sbjct 22508 ATCCTGGATCTTTGCTTTTAC 22488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447440488997040