Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq2597 91.5 3e-14 seq2967 89.7 1e-13 seq524 86.0 1e-12 seq732 82.4 1e-11 >seq2597 Length=21971 Score = 91.5 bits (100), Expect = 3e-14 Identities = 235/354 (66%), Gaps = 7/354 (2%) Strand=Plus/Plus Query 4342 GGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAGAT 4401 ||||| ||||| ||| || | | ||||| || |||||||||||||| || || Sbjct 11142 GGCTATATCCTAGAATGCGACTTGGAATATCCAGAAAATTTACATGATCTGCATTCGGAC 11201 Query 4402 CTACCTTTATGCCC--AGAACATTTTGTACCACCTGGTAGCAAGCAACAAAAACTCACGA 4459 | || ||| | | |||||| || || ||| || ||| ||||| | || Sbjct 11202 TTCCCATTAGGAGCTGAGAACAGA--GTTCCTGATGGCTCAAAACAATAAAAATTACTGA 11259 Query 4460 CAACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAG 4519 |||| || || |||| | ||||||| |||| |||| ||||||||||| |||| Sbjct 11260 CAACCCTATATAGTAAAGAACATTATGTGGTTCATTATAGGGTTTTGAAACAATTTTTAC 11319 Query 4520 ATTTAGG--TTTAGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTG 4577 | | || || | ||| | ||| | || ||| || ||||| || || || Sbjct 11320 AGATGGGAATTAAACTCTGAT-AAAGTCCATAAAGTTTTACAATTTATACAGGCACCTTG 11378 Query 4578 GCTCAAATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGa 4637 ||| || |||||| || ||| || | || ||| ||| | ||||| || || Sbjct 11379 GCTGAAGAAATATATAGACTTAAACACTGAATTGAGAACCAAAGCAACCAATGACTTTGA 11438 Query 4638 aaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAA 4691 |||| | ||||||||||| |||||||| |||||||||| || || |||||||| Sbjct 11439 AAAAGATTTTTATAAATTGATGAATAACTCGGTTTTTGGGAAAACAATGGAGAA 11492 >seq2967 Length=42327 Score = 89.7 bits (98), Expect = 1e-13 Identities = 153/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 4479 TAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTT-AGTTCTTA 4537 ||| |||||| |||| ||||||||||| ||| || ||| |||||||||| | | ||| Sbjct 38090 TAAATATGTTGTTCATTATAAAAATTTAAAATTATACTTAAATTTAGGTTTGAAATTTTA 38031 Query 4538 AGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATA 4597 | ||||| || || || ||||| | ||||| ||||| ||| ||||| | Sbjct 38030 AAAAAATTCATGGGGTGCTGCAATTTAATCAATCGCCATGGCTTAAAAATTATATTAAAC 37971 Query 4598 AAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAA 4657 ||| || | ||| | || | ||||| || ||||| | ||||||||||| | Sbjct 37970 TAAACACAAATTTAAGAACAAATGCAAGAAATGAATTTCAAAAAGAATTTTATAAATTGA 37911 Query 4658 TGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGA 4698 |||| ||| |||||||||| || ||||| || || ||| Sbjct 37910 TGAACAATAGTATTTTTGGAAAAACTATGGAAAACGTGCGA 37870 >seq524 Length=82784 Score = 86.0 bits (94), Expect = 1e-12 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879 |||| ||| ||| ||| ||||| | ||||| |||||||| ||| | |||||||| |||| Sbjct 43971 TTAACAAAACTAAAGTATGCTTTGATAAGCCCATCTATGTTGGGATGAGTATATTGGATT 43912 Query 4880 TATCTAAA-ATTTATATTTATGACTTTCATTACAAT 4914 |||| || ||||| || || ||||||||||||||| Sbjct 43911 TATCCAAGCATTTA-ATGTACGACTTTCATTACAAT 43877 >seq732 Length=48497 Score = 82.4 bits (90), Expect = 1e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 4822 AAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATTTA 4881 || ||| ||| ||||||||| | ||||| |||||||| ||| | |||||||| ||| || Sbjct 22928 AACAAAACTAAAGTTTGCTTTGATAAGCCCATCTATGTTGGGATGAGTATATTGGATCTA 22987 Query 4882 TCTAAA-ATTTATATTTATGACTTTCATTACAAT 4914 || || ||||| || || ||||||||||||||| Sbjct 22988 TCCAAGCATTTA-ATGTACGACTTTCATTACAAT 23020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97797772608956