Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_006659.1 Length=41573 Score E Sequences producing significant alignments: (Bits) Value seq65048 96.9 9e-16 seq15864 96.9 9e-16 seq834 96.9 9e-16 seq91497 91.5 4e-14 seq72265 91.5 4e-14 seq15558 89.7 1e-13 seq6235 89.7 1e-13 seq94854 86.0 2e-12 seq40902 86.0 2e-12 >seq65048 Length=3433 Score = 96.9 bits (106), Expect = 9e-16 Identities = 89/112 (79%), Gaps = 7/112 (6%) Strand=Plus/Plus Query 34872 GCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCATGCATATCATATA 34931 || |||||||||||| | |||| || ||| ||| |||||||||||||| || || Sbjct 115 GCACGCGCAAGCGCGTGG-TTGAATAAAGAATTTACATATATTTTCATG------ATGTA 167 Query 34932 TTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATCTCAAT 34983 || ||||||||||||||||| || |||| |||||||| |||||||| ||| Sbjct 168 TTTGACCAATCATATCACGAACAGTTTGGGTTCACATATTTTTCATCTGAAT 219 >seq15864 Length=13838 Score = 96.9 bits (106), Expect = 9e-16 Identities = 98/126 (78%), Gaps = 10/126 (8%) Strand=Plus/Plus Query 34859 AGAATTCAAATTTGCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCA 34918 |||||| || |||||||||||||||| | | || |||||| ||| |||||||||||| Sbjct 13549 AGAATT--AACGTGCGCGCGCAAGCGCGTGG-TGGAATATAGAATTTACATATATTTTCA 13605 Query 34919 TGCATATCATATATTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATC 34978 | || |||| | ||||||||||||||||| |||| |||||||| ||||||| Sbjct 13606 T-------ATGTATTTGAATAATCATATCACGAATAGTTTGGGTTCACATATTTTTCATC 13658 Query 34979 TCAATT 34984 | |||| Sbjct 13659 TGAATT 13664 >seq834 Length=99160 Score = 96.9 bits (106), Expect = 9e-16 Identities = 98/126 (78%), Gaps = 9/126 (7%) Strand=Plus/Minus Query 34859 AGAATTCAAATTTGCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCA 34918 |||||| || |||||||||||||||| | |||| |||||| ||| |||||||||||| Sbjct 85922 AGAATT--AACGTGCGCGCGCAAGCGCGTGT-TTGAATATAGAATTTACATATATTTTCA 85866 Query 34919 TGCATATCATATATTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATC 34978 || || |||| ||||||||||||||||| || |||| ||| ||| |||||| Sbjct 85865 TG------ATGTATTTGACCAATCATATCACGAACAGTTTGGATTCCTATATTTTTCATT 85812 Query 34979 TCAATT 34984 | |||| Sbjct 85811 TGAATT 85806 >seq91497 Length=3882 Score = 91.5 bits (100), Expect = 4e-14 Identities = 101/133 (76%), Gaps = 9/133 (7%) Strand=Plus/Minus Query 34859 AGAATTCAAATTTGCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCA 34918 |||||| || || ||||| |||| | | |||| || ||| |||||||||||||||| Sbjct 3535 AGAATT--AACGTGAGCGCGAAAGCACATGG-TTGAATACAGAATTTGCATATATTTTCA 3479 Query 34919 TGCATATCATATATTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATC 34978 || || |||| ||||||| ||||| |||| || |||| |||||||| ||||||| Sbjct 3478 TG------ATGTATTTAACCAATGATATCGCGAACAGTTTGGGTTCACATATGTTTCATC 3425 Query 34979 TCAATTTTATTAT 34991 | |||| || ||| Sbjct 3424 TGAATTATAGTAT 3412 >seq72265 Length=4806 Score = 91.5 bits (100), Expect = 4e-14 Identities = 94/121 (78%), Gaps = 8/121 (7%) Strand=Plus/Plus Query 34871 TGCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCATGCATATCATAT 34930 || ||||| |||||| | |||| |||||| ||| |||||||||||||| || | Sbjct 930 TGAGCGCGAAAGCGCATGG-TTGAATATAGAATTTACATATATTTTCATG------ATGT 982 Query 34931 ATTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATCTCAATTTTATTA 34990 ||| |||||| |||||||||| || |||| |||||||| |||||||| |||| || || Sbjct 983 ATTTGACCAATGATATCACGAACAGTTTGGGTTCACATA-TTTTCATCTGAATTATAATA 1041 Query 34991 T 34991 | Sbjct 1042 T 1042 >seq15558 Length=10428 Score = 89.7 bits (98), Expect = 1e-13 Identities = 97/127 (76%), Gaps = 9/127 (7%) Strand=Plus/Minus Query 34859 AGAATTCAAATTTGCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCA 34918 |||||| || |||| |||||| |||| | |||| |||||| ||| |||||||||||| Sbjct 6302 AGAATT--AACGTGCGTGCGCAATCGCGTGG-TTGAATATAGAATTTACATATATTTTCA 6246 Query 34919 TGCATATCATATATTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATC 34978 || || |||| |||||| ||||||||| || |||| |||||| | ||||||| Sbjct 6245 TG------ATGTATTTGACCAATGATATCACGAGCAGTTTGGGTTCACACATTTTTCATC 6192 Query 34979 TCAATTT 34985 | ||||| Sbjct 6191 TGAATTT 6185 >seq6235 Length=38661 Score = 89.7 bits (98), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 7/111 (6%) Strand=Plus/Minus Query 34874 GCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCATGCATATCATATATT 34933 |||||||||| || | |||| || ||| ||| |||||||||||||| || |||| Sbjct 26636 GCGCGCAAGCACGTGG-TTGAATACAGAATTTACATATATTTTCATG------ATGTATT 26584 Query 34934 CAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATCTCAATT 34984 ||||||||||||||||| | |||||||| |||| |||||||| |||| Sbjct 26583 TGACCAATCATATCACGAACATTTTGGTTTCCCATATTTTTCATCTGAATT 26533 >seq94854 Length=4604 Score = 86.0 bits (94), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 7/111 (6%) Strand=Plus/Plus Query 34874 GCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCATGCATATCATATATT 34933 |||||||| | || | |||| |||||| ||| ||||||||||||| ||||||| Sbjct 3612 GCGCGCAAACACGTGG-TTGAATATAGAATTTTTATATATTTTCATG------ATATATT 3664 Query 34934 CAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATCTCAATT 34984 | ||||||||||||||| | |||| |||||||| |||||||| |||| Sbjct 3665 TGATCAATCATATCACGAACACTTTGGGTTCACATATTTTTCATCTGAATT 3715 >seq40902 Length=7502 Score = 86.0 bits (94), Expect = 2e-12 Identities = 88/114 (77%), Gaps = 7/114 (6%) Strand=Plus/Minus Query 34871 TGCGCGCGCAAGCGCGCGCCTTGACTATAGAGTTTGCATATATTTTCATGCATATCATAT 34930 |||||| |||||| || | |||| |||||| || |||||||||||||| || | Sbjct 1365 TGCGCGAGCAAGCACGTGG-TTGAATATAGAATTAACATATATTTTCATG------ATGT 1313 Query 34931 ATTCAACCAATCATATCACGAATAGATTGGTTTCACATACATTTCATCTCAATT 34984 ||| ||||||| ||||||||| || |||| |||||||| | |||||| |||| Sbjct 1312 ATTTGACCAATCTTATCACGAACAGTTTGGGTTCACATATTTGTCATCTGAATT 1259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132672387409380