Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq8063 136 4e-27 >seq8063 Length=21912 Score = 136 bits (150), Expect = 4e-27 Identities = 170/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 21861 CCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAA 21920 |||| |||||||| || ||||||||||| || ||||||||||| || |||| ||||| Sbjct 13763 CCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAA 13822 Query 21921 AATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTT 21980 ||| | ||| | | | ||||||||| ||| || |||||||| |||||||| |||| Sbjct 13823 AATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTT 13882 Query 21981 CTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATA 22040 ||||| |||||||| ||| || ||||||||||| ||||||||| | || Sbjct 13883 CTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACT 13942 Query 22041 TTATTGGAAATATTACAAACCTGTTATTTGATTCAAC--TAAAAGTGGTTC 22089 |||||||||| ||||| | | | ||||| | |||||||||||| Sbjct 13943 CAATTGGAAATACAACAAA--TCTACGTGGATTCTCCTTTAAAAGTGGTTC 13991 Score = 116 bits (128), Expect = 4e-21 Identities = 160/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||||||||||||||||||||| ||||| | ||| ||||| | ||||| || | Sbjct 10432 CTTCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCT 10491 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | |||||||| || || ||||| | || || || || || || ||||| |||||||||| Sbjct 10492 TCAACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATG 10551 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 |||||| ||| || || | | || | | | | ||||| ||| ||||| | || Sbjct 10552 CAACTACTCGCTCTCCAAAAGAAGCATTTGTGTGACTGATCCAATTTAAGGCCCAGTCTG 10611 Query 21678 CCTTTTCT-TTAATACAATCAATTGTATCAATAGCTTTTAA 21717 |||| || |||| |||| | || |||||||| || || Sbjct 10612 -CTTTCCTCTTAACACAAGGTAGAGTTTCAATAGCATTGAA 10651 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 21286 ACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTC 21345 ||| |||| |||| |||||||| ||||| ||||||||||||||||| ||||||||| Sbjct 8978 ACATCCCAATTCTAGCAATAATCTGTCTGCAACAAATTCTATATATTGTTTCATTAATTC 9037 Query 21346 ACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGA 21405 | ||||| || || || || || | ||||| |||||| || || ||| |||| Sbjct 9038 ATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTCAATAGC 9097 Query 21406 GACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGGGG--GATACAATAATTGT 21463 || || ||| |||||| | || | || | | || ||| || | ||| || Sbjct 9098 CACTGCATCAGTAATTATTTGTACAA--CTCTTTTTTCTGTGGGTTTATTAACTAAGTGG 9155 Query 21464 TTAAACATCAAACATGCAAAATCACAATGCAAACC 21498 ||||||| | ||||||||||||||||| | ||| Sbjct 9156 CTAAACATGAGGCATGCAAAATCACAATGAAGACC 9190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530891425149360