Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq8063 183 4e-41 seq139299 102 1e-16 seq9609 100 4e-16 seq16555 87.8 2e-12 >seq8063 Length=21912 Score = 183 bits (202), Expect = 4e-41 Identities = 167/211 (79%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||||||||||||| || ||||| ||||| ||||||||||| || || | ||| ||||| Sbjct 13763 CCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAA 13822 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTT 33805 ||| |||||| || | | ||| ||| | ||| ||||| | ||||||||||| ||| |||| Sbjct 13823 AATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTT 13882 Query 33806 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATT 33865 |||| || |||||||| || || ||||| ||||||||||| | |||||| || | || | Sbjct 13883 CTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACT 13942 Query 33866 GGATTGGGAAAATAACAAATCTATTTGGATT 33896 ||||| || | |||||||||| |||||| Sbjct 13943 CAATTGGAAATACAACAAATCTACGTGGATT 13973 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 33109 TTTTTAAATCCCAATTC-AGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCAT 33167 |||| | |||||||||| || ||| ||||| || || || |||||||||||| |||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAAT-AATCTGTCTGCAACAAATTCTATATATTGTTTCAT 9031 Query 33168 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTC 33227 | |||| |||||||| || | ||||| | ||| | || | |||| |||||| Sbjct 9032 TAATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTC 9091 Query 33228 AATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAA 33287 ||| | || ||||| || || || | ||| ||| ||| | ||| || | ||| Sbjct 9092 AATAGCCACTGCATCAGTAATTATTTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAA 9151 Query 33288 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33328 || ||||||| | ||||| ||||| || || ||||||| Sbjct 9152 GTGGCTAAACATGAGGCATGCAAAATCACAATGAAGACCCT 9192 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || || ||||| |||| ||| ||| || || || || ||||| || || | || || Sbjct 10434 TCATCCCTACTTATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCTTC 10493 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33447 | |||||| || || || || || ||||| || || || ||||| ||||||||||| ||| Sbjct 10494 AACCAAAAGATAGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATGCA 10553 Query 33448 ATAAGTCTCTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCGGCC 33504 | | || ||||||| || || ||| | ||||| ||| ||||| || || Sbjct 10554 ACTACTCGCTCTCCAAAAGAAGCATTTGTGTGACTGATCCAATTTAAGGCCCAGTCTGCT 10613 Query 33505 TTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| | || |||||||| | ||||| || ||||| || Sbjct 10614 TTCCTCTTAACACAAGGTAGAGTTTCAATAGCATTGAA 10651 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33554 TTTCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613 ||||| | | ||||| | || ||||| || | ||| ||||||||||| ||||| | | Sbjct 13307 TTTCAGTCTTGTCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACAT 13366 Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673 ||||||| || || || ||||| || || ||||| || || || | || |||||| || Sbjct 13367 TTTCAATTGCTATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGAC 13426 Query 33674 AAAATCGTTCCGCC 33687 ||||| |||| || Sbjct 13427 TAAATCTTTCCACC 13440 >seq139299 Length=970 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 |||||| | |||||||| || |||||||| || || ||||||||||| || | || || Sbjct 88 AGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAAATG 147 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 ||| || ||||| || | || ||||| ||||||||| || | || | ||| || Sbjct 148 GTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCATCAA 207 Query 63731 CATGTGCTGAGGTCTTTCAAC 63751 |||||||||||| |||||||| Sbjct 208 CATGTGCTGAGGCCTTTCAAC 228 >seq9609 Length=20973 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||| |||||||||||||| || ||||| | |||||||| || || ||||| || || | Sbjct 20539 TACCTGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAAT 20598 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || |||||||| || || || |||||||| || ||||| ||||| || || | || | Sbjct 20599 GGATTCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAG 20658 Query 62456 ACTATTTCTAAGACC 62470 ||||| || ||||| Sbjct 20659 GCTATTCCTCAGACC 20673 >seq16555 Length=11409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 ||||| |||||||| |||||||| | |||| | | || | | ||||||||||| Sbjct 11223 CCAGGGCATTCATCAGGACACATAAGACTCCACATTTCATCTTTTTCAACTCGTTTCATG 11164 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCC 63286 || ||||| |||||||| | || ||| || | |||||| | | || || || ||||| Sbjct 11163 AAAAGATCTGGAATCCACAAGGC-ATAGAACAAATCTCTTGCCCGTTGCTCTTCTTTTCC 11105 Query 63287 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 63346 |||||| || || | || || || | | ||||||| |||||| || || || || || Sbjct 11104 TGTATTTTTCTTTAATTCAAGAAATTCAAATATATCAGCATGCCAAGGCTCTAAATAAAT 11045 Query 63347 GGCCATAACTCCAGG 63361 || | ||||||| Sbjct 11044 TGCAAATGCTCCAGG 11030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621765048672240