Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2770 138 1e-27 >seq2770 Length=41231 Score = 138 bits (152), Expect = 1e-27 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||| || | ||||| | || || || | | Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| || |||||||| || ||||| |||||| Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 |||||||| |||| | || ||||| || |||||| | | | || ||| ||||||| Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCA--GATTATA 20464 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||||||||| |||| | || |||||||||||||| || Sbjct 20465 ACATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGG 20513 Score = 120 bits (132), Expect = 3e-22 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | |||||||| ||| | ||||| ||| | || || | || || ||| ||| Sbjct 19603 ATGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGT 19662 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || ||| ||| ||| || ||||||||||||||||| ||||| Sbjct 19663 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAG 19722 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACG---TCAGCGATTAT 24167 || | || |||| | || || || || ||||||| | ||| ||| || ||| Sbjct 19723 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCG-TACGCTTTCA--GACTAT 19779 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||||||||||||||||||| | || || || || || || ||||||||| Sbjct 19780 AACATTCAAAAAGAATCTACACTGCACTTGGTTTTGAGGTTAAGAGGAGGA 19830 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || ||||||||||| ||| | |||||| | ||||| ||| | | Sbjct 19830 AATGCAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAG 19889 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || ||| || ||| ||||||||||| || || || ||||| Sbjct 19890 TGATACAATTGAAAATGTTAAAGCTAAAATTCAAGACAAAGAAGGAATTCCACCAGATCA 19949 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 |||||| | |||| | || ||||| || ||||||| | || | | | || || | Sbjct 19950 ACAGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCG-TACATTATCTGACTACA 20008 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| ||||||||||| | ||| | || || || |||||||||| Sbjct 20009 ACATTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACTGAGAGGAGG 20057 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || |||||||||||||| ||| | ||||| | ||||| || ||| Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || ||| ||| ||| || || ||||| || ||||||||||| Sbjct 19434 TGACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 19493 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| | || | | || || ||||| ||||||| | | | || ||||| Sbjct 19494 GCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAA 19553 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||||||||| ||||| | || | || || ||||| || Sbjct 19554 TATTCAAAAAGAATCTACCCTTCATCTTGTACTTAGGTTAAGAGGTGG 19601 Score = 111 bits (122), Expect = 1e-19 Identities = 175/245 (71%), Gaps = 8/245 (3%) Strand=Plus/Plus Query 23975 TTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCAT 24034 ||||||| |||||| |||| | ||||| |||||| | ||||| || | || || | Sbjct 18907 TTTTTAG--AAACAA--TGCAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATT 18962 Query 24035 CGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 24094 || || ||| | | |||||||| || | || || || ||| || |||||||| Sbjct 18963 AGAGGTTGAGCCTAGTGACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGG 19022 Query 24095 CATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGA- 24152 || ||||| || || ||||| ||||||| | |||||||||||||||||| ||| | Sbjct 19023 AATCCCTCCTGACCAGCAGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTAC 19082 Query 24153 AACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGA 24212 | |||| || |||||||| || |||||||| ||| | || || || | || ||||| Sbjct 19083 ATTGTCA--GACTATAACATCCAGAAAGAATCGACACTACACTTGGTTCTTAGGCTGAGA 19140 Query 24213 GGAGG 24217 || || Sbjct 19141 GGTGG 19145 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || || ||||| ||| | || || | || || ||| ||| Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || || || ||| || ||||||||||| ||||| ||||| Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAG 20862 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||| |||| |||| | || || || || ||||||| ||| ||| | | | || ||||| Sbjct 20863 CAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAG-AACATTATCAGACTATAA 20921 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || | ||| | ||| | ||| | ||||| || Sbjct 20922 TATTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGAGGTGG 20969 Score = 102 bits (112), Expect = 7e-17 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 24018 GGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAG 24077 || ||| | ||||| | ||||| || ||| || ||||| ||| | || ||| |||| Sbjct 22440 GGTAAAACTATTACTCTAGAAGTTGAACCCAGTGATACCATTGAGAATGTAAAAGCAAAG 22499 Query 24078 ATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAA 24137 || || ||||| ||||| || || ||||||||| | || || | | || ||||| Sbjct 22500 ATCCAGGATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAG 22559 Query 24138 CTCGAAGATGACAGAAAC--GTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATT 24195 || ||||||| ||||| | ||||| |||||||||| ||||| |||||||| | |||| Sbjct 22560 CTGGAAGATGGCAGAACCTTGTCAG--ATTATAACATCCAAAAGGAATCTACTCTGCATT 22617 Query 24196 TAGTGTT 24202 | || || Sbjct 22618 TGGTTTT 22624 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | |||||||| || | ||||| || | || || | ||||| || | | | Sbjct 20059 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC 20118 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || || ||| || |||||||| || || || |||||| Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAA 20178 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || |||||||| ||||||| | | | | || || ||| Sbjct 20179 CAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAAC 20238 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| |||| Sbjct 20239 ATTCAAAAGGAATCTACTCTTCACCTAGT 20267 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 24011 ATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAA 24070 ||| || ||||| | ||||| | ||||| ||| | | || || || || | || || Sbjct 21332 ATTTACAGGAAAGACTATTACTTTAGAAGTTGAGCCTAGTGATACTATAGAAAATGTGAA 21391 Query 24071 ACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGG 24130 ||| ||| |||||||| ||||| || || ||||| ||||| || |||| | || Sbjct 21392 GGCAAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGG 21451 Query 24131 CAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAA 24189 || ||||| || |||| |||| | | | | ||||| || || |||||||||||||| Sbjct 21452 TAAACAACTAGAGGATGGTAGAA-CATTATCAGATTACAATATACAAAAAGAATCTACTC 21510 Query 24190 TTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| | ||| | ||| | |||||||| Sbjct 21511 TTCATCTGGTGCTTAGACTTAGAGGAGG 21538 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||||||| ||| | || || | ||||| || | Sbjct 19147 ATGCAGATTTTCGTTAAAACCTTAACTGGCAAAACAATAACTCTAGAAGTTGAACAAAGT 19206 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | || ||| || ||| ||||| ||||| || || || |||||| Sbjct 19207 GACACCATCGAGAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 19266 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 || | | |||| | || |||||||| || ||| ||| | | ||| ||||| | Sbjct 19267 CAACGTTTAATTTTTGCTGGTAAGCAACTTGAGGATGGACGTACTCTTTCA--GATTACA 19324 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 | ||||| |||||||| || |||||||||| | || | ||||| ||| Sbjct 19325 ATATTCAGAAAGAATCAACCCTTCATTTAGTTCTCAGGCTAAGAGGTGGA 19374 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||||||| ||| | || || | ||||| || | | Sbjct 20515 ATGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGT 20574 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || ||| || ||| || |||||||| || ||||| ||||| Sbjct 20575 GATACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAG 20634 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || | || || | | || |||||| | ||||||| ||| | | | | | || ||||| Sbjct 20635 CAACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGA-CTTTATCAGACTATAA 20693 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 ||| ||||||||||| || | |||||||| || || Sbjct 20694 CATCCAAAAAGAATCAACTTTACATTTAGTTTTGAG 20729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429140518171170