Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2770 134 1e-26 >seq2770 Length=41231 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || || ||||| || || | || |||||||| Sbjct 19603 ATGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGT 19662 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | |||||| ||||||| |||||||||||| | || ||||||| Sbjct 19663 GACACAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGCATACCTCCTGATCAG 19722 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || |||| ||| || ||||| ||||||||| || | | || |||||| Sbjct 19723 CAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTATAAC 19782 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| ||||| | || |||| ||||| || ||||||||| Sbjct 19783 ATTCAAAAAGAATCTACACTGCACTTGGTTTTGAGGTTAAGAGGAGGAA 19831 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||||||||| || || || || |||||||| | || ||| | || Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| || ||| ||||||||||| | || |||||| Sbjct 20347 GACACAATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCTCCTGATCAA 20406 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||||| |||| ||| || || || ||||||||| || | | ||||||||| Sbjct 20407 CAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTATAAC 20466 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||| | || | || || |||||| |||| || Sbjct 20467 ATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGG 20513 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || || || | || || ||||| || || | || ||| |||| Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | ||||| |||||| |||||||||||| | || ||||||| Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCTGATCAG 20862 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||||||||| ||| || ||||| | ||||||| || ||| | | || ||||| Sbjct 20863 CAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAAT 20922 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| || || ||| | ||| | ||| | ||| | |||| || Sbjct 20923 ATTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGAGGTGG 20969 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || || ||||| | || || ||||| || || | ||| || | || Sbjct 20515 ATGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGT 20574 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || | | | | || ||| |||||| ||||||||||| | || |||||| Sbjct 20575 GATACGATAGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGGATTCCTCCAGATCAG 20634 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||| | ||| || || ||||||||||||| || || | | || |||||| Sbjct 20635 CAACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTATAAC 20694 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 || |||||||| || ||| ||||| | || ||||| Sbjct 20695 ATCCAAAAAGAATCAACTTTACATTTAGTTTTGAG 20729 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 115313 GGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAA 115372 || ||||| ||||| | ||| || |||| || || ||| | |||||| ||| Sbjct 22440 GGTAAAACTATTACTCTAGAAGTTGAACCCAGTGATACCATTGAGAATGTAAAAGCAAAG 22499 Query 115373 ATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAA 115432 || |||||||| ||| | ||| |||||| || | ||||| | ||| || || || Sbjct 22500 ATCCAGGATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAG 22559 Query 115433 TTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATG 115492 | ||||||| || |||| || | ||||||||||| ||||| || |||||| | ||| || Sbjct 22560 CTGGAAGATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTTG 22619 Query 115493 GTGTTGAGATTGCGAGGAGGAAA 115515 || ||| || | || || ||||| Sbjct 22620 GTTTTGCGACTTCGTGGTGGAAA 22642 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| || || || || || || || || || | ||| || | ||| Sbjct 20059 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC 20118 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | ||||| |||||| ||||||||||| |||| |||||| Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCAAGATAAAGAAGGAATCCCACCTGATCAA 20178 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | || | ||| || || ||| ||||||||| | || || | || || ||| Sbjct 20179 CAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAAC 20238 Query 115466 ATTCAAAAAGAGTCTACT 115483 |||||||| || |||||| Sbjct 20239 ATTCAAAAGGAATCTACT 20256 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || || || || |||||||| || | ||| ||| | || Sbjct 20971 ATGCAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGT 21030 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || ||| ||| | | ||||| || ||| ||||||||||| | || |||||| Sbjct 21031 GATACTATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAAGGAATTCCACCTGATCAA 21090 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || || | ||| || ||||| ||||||||| |||| | | || || || Sbjct 21091 CAGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAAT 21150 Query 115466 ATTCAAAAAGAGTCTAC 115482 || |||||||| || || Sbjct 21151 ATCCAAAAAGAATCAAC 21167 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 || |||||| || ||||| ||||| || || || || ||||| || | || ||| | Sbjct 18915 AACAATGCAGATCTTTGTGAAAACACTTACTGGCAAGACCATCACATTAGAGGTTGAGCC 18974 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || ||||| | | | | || || |||||| ||||||||||| |||| ||| Sbjct 18975 TAGTGACACCATAGAAAATGTTAAGGTTAAAATTCAGGATAAAGAAGGAATCCCTCCTGA 19034 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||| || || |||| ||| ||||| ||| | ||||||| || || | || || Sbjct 19035 CCAGCAGAGGCTGATTTTTGCTGGCAAGCAACTCGAAGATGGACGTACATTGTCAGACTA 19094 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| || ||||| || || |||| |||| | || || |||| || Sbjct 19095 TAACATCCAGAAAGAATCGACACTACACTTGGTTCTTAGGCTGAGAGGTGG 19145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || || ||||| | || || ||||||||||| | ||| || |||| Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | | || ||| ||||||| ||||| ||||| | || ||||| Sbjct 19434 TGACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 19493 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | || | ||| || |||||| | ||||||| || | | || ||||| Sbjct 19494 GCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAA 19553 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||||||||| ||||| Sbjct 19554 TATTCAAAAAGAATCTAC 19571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424557014441680