Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4198 134 9e-27 seq2770 120 2e-22 >seq4198 Length=21195 Score = 134 bits (148), Expect = 9e-27 Identities = 87/96 (91%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 8578 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGAATCTCG 8519 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||||||| ||||||||||||||||||| |||||||| Sbjct 8518 TTAATCCATTCATGCGCGTCACTAATTGGATGACGA 8483 >seq2770 Length=41231 Score = 120 bits (132), Expect = 2e-22 Identities = 167/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||| | | | || |||||||| || || || ||||||||||||| Sbjct 19377 CATT-CCACCTCTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAAT 19319 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | |||| | || || | ||| || || ||||| |||| ||||||||||| | Sbjct 19318 CTGAAAGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAG 19259 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||| ||||| |||||| || || |||| || || || | || Sbjct 19258 GTGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTT 19199 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||||| || || ||||| || || |||||||| ||||| ||||||||| Sbjct 19198 CAACTTCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCATG 19146 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| | | | ||| | ||| |||||| |||||||||||||| || || || Sbjct 20969 CCACCTCTAAGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGAT 20910 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | || || | |||||||| ||||| || || || || ||||| | || Sbjct 20909 AATGTTCTGCCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGA 20850 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||| || |||||| ||| ||||| | | |||||| | ||||| Sbjct 20849 ATGCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAACC 20790 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || |||||||| |||||||| || |||||||| ||||| Sbjct 20789 TCTAGAGTTATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||||| ||||| || | ||| | ||| || || ||||| ||||| |||| Sbjct 20059 TACCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAG 20000 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || ||| | || || | || || || ||||| |||| | |||||||| | | Sbjct 19999 ATAATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTG 19940 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| || ||||| | | ||||| | | || | Sbjct 19939 GAATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTA 19880 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||||||||||| || || || || ||||| || |||||||| Sbjct 19879 CTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 107 bits (118), Expect = 1e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167 ||||| ||||||||| || ||||| ||||||||||| || || | | || || Sbjct 21521 CACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGATAATGTTCTACCATCCTC 21462 Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 || |||||| || ||||| || || | || ||||| | || | ||| |||||||| Sbjct 21461 TAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCTTTGTCTTG 21402 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 ||||||| ||||||||| | | |||||| | | ||||||||||| |||||||| || Sbjct 21401 AATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACTTCTAAAGTAATAGTCTT 21342 Query 38288 ACCCGTCAA 38296 || || || Sbjct 21341 TCCTGTAAA 21333 Score = 105 bits (116), Expect = 4e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| ||||||||||| ||||| ||||||| | ||| | || |||| ||| Sbjct 20261 TGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGC 20202 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || |||||||| | | |||||||| | |||| |||||||| || |||||| Sbjct 20201 TTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGAATTTTA 20142 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| || || | | || || | | ||||||||||||||| || || ||||| || Sbjct 20141 GCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTA 20082 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | || || || || || ||||| Sbjct 20081 AGAGTCTTTACAAAGATTTGCAT 20059 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || | | || | |||||| || || ||||||||||| || || | Sbjct 19603 TACCACCTCTTAACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTG 19544 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || || | |||||| || ||||| |||| | || ||||||| | Sbjct 19543 ATAGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAG 19484 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || || ||||||| || ||||| | | || || | ||| | Sbjct 19483 GAATTCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTA 19424 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| ||||| |||||||| || || ||||| ||||| || ||||| Sbjct 19423 CTTCTAACGTAATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCAT 19375 Score = 98.7 bits (108), Expect = 7e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 38083 AATCA-TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTG 38141 ||||| || ||||| | | ||||| |||||||| ||||| |||||||| || || Sbjct 22648 AATCAGTTTCCACCACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTA 22589 Query 38142 TAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGA 38201 ||||| ||||| | | || || | || || || ||||| || || || |||||| Sbjct 22588 TAATCTGACAAGGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGA 22529 Query 38202 TCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCA 38261 || | ||| | ||| ||||| ||| || ||| || ||||||| | ||||| | Sbjct 22528 TCAGGGGGAATGCCCTCTTTATCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTG 22469 Query 38262 CTTTCAACTTCTAATGTAATAGTTTTACC 38290 ||||||||||| |||||||||||||| Sbjct 22468 GGTTCAACTTCTAGAGTAATAGTTTTACC 22440 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || ||||| | |||| || | ||||| || || ||||| |||||||| | Sbjct 21201 CATT-CCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGT 21143 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | || | || |||| |||||||| |||||||| || | |||||||| | Sbjct 21142 CAGAAAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAG 21083 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||| || ||| || ||| ||||| | | |||||| | | | Sbjct 21082 GTGGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCT 21023 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||||||||| || ||||| || || | || || || || || |||||| Sbjct 21022 CAACTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCATG 20970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334327469595434