Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8063 192 7e-44 seq139299 105 8e-18 seq9609 100 4e-16 seq16555 89.7 7e-13 >seq8063 Length=21912 Score = 192 bits (212), Expect = 7e-44 Identities = 168/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 ||||||||||| || ||||| ||||| ||||||||||| || || | ||| ||||||| Sbjct 13765 AAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATATAAAA 13824 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 | |||||| || | | ||| ||| | ||| ||||| | ||||||||||| ||| |||||| Sbjct 13825 TGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAACTTCT 13884 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 33224 || || |||||||| || || ||||| ||||||||||| | |||||| || || || | | Sbjct 13885 TCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTACTCA 13944 Query 33225 ATTGGAAAAATAACAAATCTATTTGGATT 33253 |||||||| | |||||||||| |||||| Sbjct 13945 ATTGGAAATACAACAAATCTACGTGGATT 13973 Score = 107 bits (118), Expect = 2e-18 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 32466 TTTTTAAATCCCAATTC-AGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCAT 32524 |||| | |||||||||| || ||| ||||| ||||| ||||||||||||||| |||||| Sbjct 8973 TTTTCACATCCCAATTCTAGCAAT-AATCTGTCTGCAACAAATTCTATATATTGTTTCAT 9031 Query 32525 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC 32584 | |||| |||||||| || | ||||| | ||| | || | |||| |||||| Sbjct 9032 TAATTCATTGTTCATTCCAATTAAAGCCACTGGTAAAGCTTCTGTCAAGAATTGTTGTTC 9091 Query 32585 AATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA 32644 ||||| || || || || || || | ||| ||| ||| | ||| || | ||| Sbjct 9092 AATAGCCACTGCATCAGTAATTATTTGTACAACTCTTTTTTCTGTGGGTTTATTAACTAA 9151 Query 32645 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 32685 || ||||||| | ||||| ||||| || || ||||||| Sbjct 9152 GTGGCTAAACATGAGGCATGCAAAATCACAATGAAGACCCT 9192 Score = 100 bits (110), Expect = 4e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 32911 TTTCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 32970 ||||| | | ||||| | ||||||||||| | ||| ||||||||||| ||||| | | Sbjct 13307 TTTCAGTCTTGTCTTTGATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACAT 13366 Query 32971 TTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTAC 33030 ||||||| || ||||| ||||| || |||||||| || || || | || |||||| || Sbjct 13367 TTTCAATTGCTATTTGGAATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGAC 13426 Query 33031 AAAATCGTTC 33040 ||||| ||| Sbjct 13427 TAAATCTTTC 13436 >seq139299 Length=970 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 |||||| | |||||||| || |||||||| ||||| ||||||||||| || | || || Sbjct 88 AGTTCCGGAGTTAAATAATGTTGGAGAAGCATGAGTGAACCATTTTTCTGACATTAAATG 147 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| || ||||| || | || ||||| ||||||||| || | || | ||| || Sbjct 148 GTAAGTTTCAATGGCAGCATCAATATCATCAGAATGAATTCCGACAGATACTCTCATCAA 207 Query 63586 CATGTGCTGAGGTCTTTCAAC 63606 |||||||||||| |||||||| Sbjct 208 CATGTGCTGAGGCCTTTCAAC 228 >seq9609 Length=20973 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||| |||||||||||||| || ||||| | |||||||| || || ||||| || || | Sbjct 20539 TACCTGAAATTCTCCAGATAAAACTCTTCTTGTGTAAATGTTGCTAGTATATGGCTCAAT 20598 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || |||||||| || || || |||||||| || ||||| ||||| || || | || | Sbjct 20599 GGATTCATTATTACCTAATATCTGAGCAGTAGAAGCAGTGGGCATTGGAGCAAGTAAAAG 20658 Query 62311 ACTATTTCTAAGACC 62325 ||||| || ||||| Sbjct 20659 GCTATTCCTCAGACC 20673 >seq16555 Length=11409 Score = 89.7 bits (98), Expect = 7e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| |||||||| |||||||| | |||| | | || | | ||||||||| Sbjct 11226 AGACCAGGGCATTCATCAGGACACATAAGACTCCACATTTCATCTTTTTCAACTCGTTTC 11167 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTT 63138 || || ||||| |||||||| | || ||| || | |||||| | | || || || || Sbjct 11166 ATGAAAAGATCTGGAATCCACAAGGC-ATAGAACAAATCTCTTGCCCGTTGCTCTTCTTT 11108 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 ||||||||| || || | || || || | | ||||||| |||||| || || || || Sbjct 11107 TCCTGTATTTTTCTTTAATTCAAGAAATTCAAATATATCAGCATGCCAAGGCTCTAAATA 11048 Query 63199 TATGGCCATAACTCCAGG 63216 || || | ||||||| Sbjct 11047 AATTGCAAATGCTCCAGG 11030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632429572394400