Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2770 138 1e-27 seq13140 87.8 2e-12 >seq2770 Length=41231 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || || || || ||| | || || | ||||| || | Sbjct 19147 ATGCAGATTTTCGTTAAAACCTTAACTGGCAAAACAATAACTCTAGAAGTTGAACAAAGT 19206 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| | | |||| |||| ||| ||||| ||||| ||||||||||| || Sbjct 19207 GACACCATCGAGAACGTTAAAGCTAAAATTCAA-GACAAGGAAGGTATTCCACCTGATCA 19265 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||| || || ||| | || |||| || ||| | |||||||| Sbjct 19266 ACAACGTTTAATTTTTGCTGGTAAGCAACTTGAGGATGGACGTACTCTTTCAGATTACAA 19325 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||| |||||||| || || |||||||| || ||||||||||| |||| Sbjct 19326 TATTCAGAAAGAATCAACCCTTCATTTAGTTCTCAGGCTAAGAGGTGGAA 19375 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || ||| |||| ||| | ||||| ||| | | Sbjct 20971 ATGCAAATTTTTGTTAAGACTCTTACTGGGAAAACCATAACATTAGAAGTTGAGCCTAGT 21030 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | ||| | || | ||| || |||||||| ||||||||||| || Sbjct 21031 GATACTATTGAAAATGTAAAGGCTAAGATTCAA-GATAAAGAAGGAATTCCACCTGATCA 21089 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | || ||||| || ||||| ||||||||| ||| || | || ||||| Sbjct 21090 ACAGAGGCTCATATTTGCAGGAAAACAGCTAGAAGATGGTCGAACCCTTTCTGACTACAA 21149 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||| ||||||||||| || || || | || || |||| |||||||||| Sbjct 21150 TATCCAAAAAGAATCAACACTTCACCTTGTTCTGCGGCTTAGAGGAGGAA 21199 Score = 129 bits (142), Expect = 5e-25 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || || || || |||||| |||| || | ||||| || | Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || || | || ||||||||| ||| || || ||||| ||||| || || Sbjct 19434 TGACACGATAGAA--AATGTTAAAGCAAAAATTCAA-GATAAGGAAGGAATTCCTCCCGA 19490 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || | || ||||| || |||||| | ||||||| ||||||| | || || Sbjct 19491 TCAGCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTA 19550 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| || || ||| | || || ||| ||||||| || Sbjct 19551 TAATATTCAAAAAGAATCTACCCTTCATCTTGTACTTAGGTTAAGAGGTGG 19601 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| |||||||| ||||| |||||| | || || | || || ||| | | Sbjct 20743 ATGCAAATATTCGTAAAGACCTTGACTGGTAAAACAATAACTCTAGAGGTTGAGCCCAGT 20802 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | || || |||| ||| || |||||||| ||||| ||||| || Sbjct 20803 GATACTATTGAAAATGTAAAGGCTAAAATTCA-AGATAAAGAAGGCATTCCTCCTGATCA 20861 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||||||||| || ||||| | ||||||| | || | || || || Sbjct 20862 GCAGCGACTTATTTTTGCAGGAAAACAGCTTGAAGATGGCAGAACATTATCAGACTATAA 20921 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||| |||||||| || ||| | ||||| || || ||||| || Sbjct 20922 TATTCAAAAGGAATCCACTCTGCATCTTGTGCTCAGACTTAGAGGTGG 20969 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || |||||| | || ||| | || || ||||| | Sbjct 19603 ATGCAGATCTTTGTAAAGACACTTACTGGTAAAACAATAACATTAGAGGTTGAGTCCAGT 19662 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || ||||||||| ||| || |||||||| || || ||||| Sbjct 19663 GACACAATTGA--AAATGTAAAAGCAAAAATTCA-AGATAAAGAAGGCATACCTCCTGAT 19719 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| || ||||| ||||||||| || || | || || Sbjct 19720 CAGCAACGTCTCATTTTTGCTGGTAAACAGCTAGAAGATGGGCGTACGCTTTCAGACTAT 19779 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || |||||||||||||| || || || || || | ||| |||||||||||| Sbjct 19780 AACATTCAAAAAGAATCTACACTGCACTTGGTTTTGAGGTTAAGAGGAGGAA 19831 Score = 120 bits (132), Expect = 3e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 25044 GAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGG 25102 ||||| ||| | ||| ||||| || ||||| |||||| ||| |||||||| || Sbjct 21357 GAAGTTGAGCCTAGTGATACTATAGAAAATGTGAAGGCAAAAATTCAA-GACAAAGAGGG 21415 Query 25103 GATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCAC 25162 |||||||| || || ||| || |||||||||| || |||||| |||| |||| | | || Sbjct 21416 CATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAAACAACTAGAGGATGGTAGAAC 21475 Query 25163 TGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGG 25222 | ||||||||||| ||||||||||| || || ||| | ||||| || || ||||| Sbjct 21476 ATTATCAGATTACAATATACAAAAAGAATCTACTCTTCATCTGGTGCTTAGACTTAGAGG 21535 Query 25223 AGG 25225 ||| Sbjct 21536 AGG 21538 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||||||| | || ||||| | || ||| | ||||| || | Sbjct 20059 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACAATAACATTAGAAGTTGAACCTAGC 20118 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || || |||| ||| || |||||||| || |||||||| || Sbjct 20119 GACACCATTGAAAACGTAAAGGCTAAAATTCA-AGATAAAGAAGGAATCCCACCTGATCA 20177 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | || ||||| || || ||| ||||||||| || ||| || || ||||| Sbjct 20178 ACAGAGATTGATATTTGCTGGTAAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAA 20237 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| ||||| || || || |||| || |||| Sbjct 20238 CATTCAAAAGGAATCTACTCTTCACCTAGTTCTCCGGCT 20276 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| | || ||||| |||| ||| | || ||||| | | Sbjct 20287 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAGACCATTACACTTGAGGTGGAACCAAGT 20346 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| || | ||| || |||||||| ||||| ||||| Sbjct 20347 GACACAATTGAAAATGTCA---AAGCTAAGATTCAA-GATAAAGAAGGTATTCCTCCTGA 20402 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| | | |||||||| || || || ||||||||| |||||| | ||||| Sbjct 20403 TCAACAGAGACTCATTTTTGCTGGTAAGCAGCTAGAAGATGGTCGCACACTATCAGATTA 20462 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||||||||| || || || | || |||| | ||||| || Sbjct 20463 TAACATTCAAAAAGAATCTACACTTCACCTTGTATTAAGATTGAGAGGTGG 20513 Score = 111 bits (122), Expect = 1e-19 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || || ||||| || |||||| | || || | ||||| || | | Sbjct 20515 ATGCAAATATTCGTTAAAACTTTAACTGGTAAAACAATAACTCTTGAAGTAGAACCAAGT 20574 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| ||| || |||||||||||||| || || Sbjct 20575 GATACGATAGAA--AATGTTAAAGCCAAAATTCAA-GATAAAGAAGGGATTCCTCCAGAT 20631 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || |||| ||||| || || ||||||||||||| | ||| | || || Sbjct 20632 CAGCAACGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGCAGGACTTTATCAGACTAT 20691 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || ||||||||||| || |||||||||| | ||||| Sbjct 20692 AACATCCAAAAAGAATCAACTTTACATTTAGTTTTGAGGCT 20732 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| || || || ||| | || || | ||||| ||| | Sbjct 19830 AATGCAGATTTTTGTGAAGACATTAACTGGGAAAACTATTACCTTAGAAGTAGAGCCTAG 19889 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| || || || | || |||| |||| ||| ||||||||||| |||||||| || Sbjct 19890 TGATACAATTGAA--AATGTTAAAGCTAAAATTCAA-GACAAAGAAGGAATTCCACCAGA 19946 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | |||||||| || || || | ||||||| ||| || | || || Sbjct 19947 TCAACAGAGGTTAATTTTTGCTGGTAAGCAGCTTGAAGATGGTCGTACATTATCTGACTA 20006 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| ||||| |||||||| || | ||| | || | | || |||||||| Sbjct 20007 CAACATTCAGAAAGAATCTACTTTGCATCTCGTCTTGCGACTGAGAGGAGG 20057 >seq13140 Length=15713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||||||||| |||||||| | |||||||| || || ||||| ||||||| | Sbjct 15482 AGGCATTCCACCTGATCAACAGCGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGAAG 15423 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || | || ||||||||||| |||||||| || |||||||||| || Sbjct 15422 AACATTATCTGACTACAATATTCAGAAAGAATCTACATTACATTTAGTTCT 15372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432526242180410