Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq8063 165 9e-36 seq18730 98.7 1e-15 seq150963 96.9 4e-15 >seq8063 Length=21912 Score = 165 bits (182), Expect = 9e-36 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 ||| | |||||||||||| || ||||| |||||||||||| || || ||||| ||| Sbjct 13761 TACCAAATTTTCATTGACAATTCCATCACTTGCTGCAAAAAATGCTAAAATATGAGATAT 13820 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGAC 93594 ||||||||| || ||| ||| | || ||||| || | |||||| || | ||| || Sbjct 13821 AAAATGTTTTTCTTCAGATTTTAATTTTTCCCAGTCATTCAAATCTTTAGATAAATCAAC 13880 Query 93595 TTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATA 93654 |||||| ||||||||||| || |||||||||||||| ||||| | ||| || ||||| || Sbjct 13881 TTCTTCAACAGTCCAAAAAGAAGCTTCTGCTTTTTTATACATCTGCCAGATATCTTGGTA 13940 Query 93655 TTGAATTGGAAATATGACAAA 93675 | ||||||||||| ||||| Sbjct 13941 CTCAATTGGAAATACAACAAA 13961 Score = 149 bits (164), Expect = 7e-31 Identities = 161/212 (76%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 93127 TATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATAT 93186 ||| || |||||||||||||| | ||| || | || |||| |||||| | |||||| || Sbjct 10445 TATTAATTCATTGCTGAATGTAAGACCAGGCATAAGACCTCTTTTCTTCAACCAAAAGAT 10504 Query 93187 TGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 || |||||| |||||| |||||||| ||||| || || |||||||| || | || || Sbjct 10505 AGATGCAAAAGAACCAGAGAAAAATATCCCTTCAACTGCAGCAAATGCAACTACTCGCTC 10564 Query 93247 GGCAAAATTTGCGGAATTACTG---CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTT 93303 ||||| | | ||| || |||||||| ||||| ||||| || ||||| |||| Sbjct 10565 TCCAAAA---GAAGCATTTGTGTGACTGATCCAATTTAAGGCCCAGTCTGCTTTCCTCTT 10621 Query 93304 AATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 || ||||||||| ||||| ||||| || |||| Sbjct 10622 AACACAAGGTAGAGTTTCAATAGCATTGAATA 10653 Score = 111 bits (122), Expect = 2e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| |||| || ||||||||||||||| ||||| || ||||| |||||| Sbjct 13324 ATGTATGTATCAATTAGAAGGCTATACATTTCAGAATGTACATTTTCAATTGCTATTTGG 13383 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477 ||||| || || ||||| ||||| || | |||||||||||| |||||| || || Sbjct 13384 AATCCATAAAAGCATCTTGCTTCTGTTACTTGCACTTCTTGACTAAATCTTTCCAC 13439 >seq18730 Length=10956 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||| |||||||| |||||||||||||||||||||| |||||||| | | ||||| Sbjct 8265 GTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGCG 8324 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||| |||||||| Sbjct 8325 TGGGTTCGAACCCCACTTCTGACAAA 8350 >seq150963 Length=1085 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||| | | |||| Sbjct 695 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAAAGAGAGC 754 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 755 GTGGGTTCGAACCCCACTTCTGACA 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555804059181360