Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2770 158 2e-33 seq23510 86.0 1e-11 seq16710 86.0 1e-11 seq9264 86.0 1e-11 >seq2770 Length=41231 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 ||||| | ||| || || || |||||||| ||||||||||| || ||||| | |||||| Sbjct 20498 AATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCT 20439 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 |||| |||||| || || || |||||||| ||||| || || ||||| ||||| || ||| Sbjct 20438 TCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCT 20379 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| || ||||| || || ||||| || ||| || || | || ||||| Sbjct 20378 TGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTC 20319 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || ||||| || |||||||| Sbjct 20318 TTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | ||| |||| || | ||| || || || ||||||||||| || || || | Sbjct 21199 TTCCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAG 21140 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||||| ||| || || || |||||||| || ||||| || |||| Sbjct 21139 AAAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTG 21080 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| || ||||||||||| ||||| || || || || || | || | Sbjct 21079 GAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAA 21020 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || |||||||| || || || ||||| || || || ||||| Sbjct 21019 CTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 143 bits (158), Expect = 5e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | | | ||| |||||||| || || || |||||||| |||||||| || | Sbjct 19831 TTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTG 19772 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||||||||| ||| || || || || ||||| | ||| || || || | Sbjct 19771 AAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAG 19712 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | |||||||| || |||||||| ||||| || || || || ||||| || || | Sbjct 19711 GTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || || ||||| || || || ||||| || || |||||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || || |||| || || ||||||||||||||||| || || Sbjct 20741 CCACCACGAAGCCTCAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGAT 20682 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||||| ||||||||||| ||||| || || || || || | ||| || || || ||| Sbjct 20681 AAAGTCCTGCCATCTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGA 20622 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || |||||||| || || || || || || || || || ||||||| Sbjct 20621 ATCCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACT 20562 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || ||||| || || | || || |||||||| ||||| Sbjct 20561 TCAAGAGTTATTGTTTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || || || || || || ||||| || || || ||||| || || || | ||||| || Sbjct 19355 ACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTCA 19296 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || | | |||||| || |||||||| ||||||||||||||| Sbjct 19295 AGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 19236 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || || ||| |||||||||||| | ||| ||||| | || || ||||| Sbjct 19235 ATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTTTG 19176 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||| || ||||| |||||||| Sbjct 19175 CCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 127 bits (140), Expect = 4e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 ||||| || ||||| ||||| ||||| || || || || || ||||||||||||||||| Sbjct 22642 TTTCCACCACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCT 22583 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 || | || || |||||||| | |||||| || || || || || | ||||| || || Sbjct 22582 GACAAGGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGG 22523 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 |||||||| || || || || |||||||| || || ||| ||||| || | ||| Sbjct 22522 GGAATGCCCTCTTTATCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCA 22463 Query 68412 ACTTCCAAGGTGATGGTTTTTCC 68434 ||||| | || || ||||| || Sbjct 22462 ACTTCTAGAGTAATAGTTTTACC 22440 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||||||| || || ||||| ||||||||||| || || | ||| | |||||||| Sbjct 19127 ACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGTCCATCTTCG 19068 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || || || || || || || ||||| || || || ||||| || || ||| Sbjct 19067 AGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCCTGA 19008 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || |||| || || |||||||| | || || || || |||||||| || Sbjct 19007 ATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTGATGGTCTTG 18948 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || || || || || ||||||||| Sbjct 18947 CCAGTAAGTGTTTTCACAAAGATCTGCATT 18918 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || ||||| || | || | || || ||||| || ||||| || || || Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGAT 19998 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| | |||||| || || || || | || ||||| || |||||| Sbjct 19997 AATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGA 19938 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| ||||||||||| || || || || || || || || | |||||| Sbjct 19937 ATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACT 19878 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || ||||| || || | ||||| || || ||||||||| Sbjct 19877 TCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCATT 19830 Score = 111 bits (122), Expect = 3e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| || ||||| || ||||| || || | ||| || |||||||| | Sbjct 20950 CAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCAA 20891 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||| || || || || || |||| || || || || ||||||||||| || ||||||| Sbjct 20890 GCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTTATCTTGAA 20831 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || ||||| || || || || || | || || || | || || ||||| | Sbjct 20830 TTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTATTGTTTTAC 20771 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | |||||| |||||||| ||||| Sbjct 20770 CAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 100 bits (110), Expect = 5e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | ||| | | |||| || || || || |||||||| || || ||||| || Sbjct 21538 CCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGAT 21479 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| || ||||| |||| || || || || || || || || || || || |||||| Sbjct 21478 AATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGA 21419 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || ||||||||||| |||||||| || || || || || | || ||| Sbjct 21418 ATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACT 21359 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || || || || || ||||| || Sbjct 21358 TCTAAAGTAATAGTCTTTCCTGT 21336 >seq23510 Length=29663 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 10505 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 10446 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 10445 CCCACGTTGGGC 10434 >seq16710 Length=14302 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 4860 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 4801 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 4800 CCCACGTTGGGC 4789 >seq9264 Length=22169 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||| ||||| | || ||||||| || | |||||||||||||||| Sbjct 7228 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 7169 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 7168 CCCACGTTGGGC 7157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919873460212080