Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2770 105 5e-18 >seq2770 Length=41231 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || ||||||||||||| || ||||||||||| | ||| ||| || Sbjct 19374 AATGCAAATCTTCGTTAAAACATTAACTGGTAAAACCATTACGTTAGAAGTAGAACCCAG 19433 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || ||| | | || |||| ||||||| ||||| || || | ||| | || Sbjct 19434 TGACACGATAGAAAATGTTAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCCGATCA 19493 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||||| | |||||||| || |||||||| |||||| ||| | | || || || Sbjct 19494 GCAGAGGTTAATCTTTGCAGGTAAACAACTTGAAGATGGTCGCACTCTATCAGACTATAA 19553 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||| || |||||||| |||||| | ||| | | ||| |||| || Sbjct 19554 TATTCAAAAAGAATCTACCCTTCATCTTGTACTTAGGTTAAGAGGTGG 19601 Score = 93.3 bits (102), Expect = 3e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 21917 AAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAA 21976 ||||||| || |||||||| | || | | || ||||| ||||| |||||||| || Sbjct 21395 AAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAGCAGAGGCTTATTTTTGCTGGTAA 21454 Query 21977 ACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 22036 ||||||||| ||| | ||| | | ||||||||||| || || |||||||||||||| Sbjct 21455 ACAACTAGAGGATGGTAGAACATTATCAGATTACAATATACAAAAAGAATCTACTCTTCA 21514 Query 22037 TATGGT 22042 | |||| Sbjct 21515 TCTGGT 21520 Score = 82.4 bits (90), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 21918 AAAATTGCCGATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTATCTTTGCTGGC 21974 |||||| |||||||| || | ||||| | ||||||||| | || |||||||| Sbjct 20143 AAAATTCAAGATAAAGAAGGAATCCCACCTG---ATCAACAGAGATTGATATTTGCTGGT 20199 Query 21975 AAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTT 22034 || |||||||||||| ||| || | || ||||| ||||| ||||||||||||||| Sbjct 20200 AAGCAACTAGAAGATGGCCGTACTCTGTCTGACTACAACATTCAAAAGGAATCTACTCTT 20259 Query 22035 CA 22036 || Sbjct 20260 CA 20261 Score = 82.4 bits (90), Expect = 5e-11 Identities = 101/136 (74%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 |||||||| ||| | ||| | ||||||||||| || |||||||| || || |||||| Sbjct 20380 GATAAAGAAGGTATTCCTCCTGATCAACAGAGACTCATTTTTGCTGGTAAGCAGCTAGAA 20439 Query 21987 GAT--TTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTAT 22044 ||| | | ||||| | ||||| || ||||| || |||||||| ||||| | |||| Sbjct 20440 GATGGTCGCACACTAT--CAGATTATAACATTCAAAAAGAATCTACACTTCACCTTGTAT 20497 Query 22045 TACGTTTACGAGGAGG 22060 || | || |||| || Sbjct 20498 TAAGATTGAGAGGTGG 20513 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||||||||| | || | |||||| | |||||||||||||| || || || ||| Sbjct 22506 GATAAAGAGGGCATTCCCCCTGATCAACAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAA 22565 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | ||| || | ||||| || || || |||||||||||||| ||| |||| || Sbjct 22566 GATGGCAGAACCTTGTCAGATTATAACATCCAAAAGGAATCTACTCTGCATTTGGTTTTG 22625 Query 22047 CGTTTACGAGGAGGA 22061 || | || || ||| Sbjct 22626 CGACTTCGTGGTGGA 22640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357462185632156