Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2770 141 2e-28 >seq2770 Length=41231 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 |||||||| ||||||| || ||||||||| ||||||||||| | || ||||| || Sbjct 19589 CTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCA 19530 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||| | |||||| ||||| ||||| | | ||| ||| || |||||||| ||| Sbjct 19529 TCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTA 19470 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 || || ||||| ||||| || |||||||| | || || | ||||||||| | ||| || Sbjct 19469 TCTTGAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATG 19410 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || | || || ||||| || |||||| Sbjct 19409 GTTTTACCAGTTAATGTTTTAACGAAGATTTGCATT 19374 Score = 140 bits (154), Expect = 8e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| ||||| | || || || || ||||||| ||||||||||| || Sbjct 21162 TTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAA 21103 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | ||||||| | ||| |||||||||||||| || || || || || || || Sbjct 21102 TATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATT 21043 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| ||| || | || ||||| | || || || ||||| || |||||||| || Sbjct 21042 TTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAAC 20983 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 20982 AAAAATTTGCAT 20971 Score = 136 bits (150), Expect = 9e-27 Identities = 148/195 (76%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| |||||||| | | || | || ||||||||||| || || || || Sbjct 20706 TTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATCTTCTAATTGCTTACCAGCAAA 20647 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| ||||| || ||| ||||| || ||||||||||| || ||||| ||||| || Sbjct 20646 GATAAGACGTTGCTGA---TCTGGAGGAATCCCTTCTTTATCTTGAATTTTGGCTTTAAC 20590 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||||| | ||| || | ||||||||| || || || || || || || | ||| || Sbjct 20589 ATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGTTTTACCAGTTAAAGTTTT 20530 Query 288459 GACGAATATCTGCAT 288473 |||||||| ||||| Sbjct 20529 AACGAATATTTGCAT 20515 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| || ||| ||||| || || ||||| | Sbjct 20285 CCACCACGAAGCCGGAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 20226 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||||| ||| || || || || |||| | ||||||| | |||| Sbjct 20225 AGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGG 20166 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||||||||| || ||||| || || |||||||| || | ||||| | ||| ||| Sbjct 20165 ATTCCTTCTTTATCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACT 20106 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| || || |||||||| || || || ||||| Sbjct 20105 TCTAATGTTATTGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||||| || || ||||| | ||| ||| ||||| |||||||||| Sbjct 20973 CATG-CCACCTCTAAGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGT 20915 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | | || | || ||||| | ||||||||||| || || || ||||| ||| | Sbjct 20914 CTGATAATGTTCTGCCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAG 20855 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || ||||||||||| || ||||| || || || ||||| |||| ||| || | | Sbjct 20854 GAGGAATGCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCT 20795 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || || || || || |||| ||||| |||||||| ||||| Sbjct 20794 CAACCTCTAGAGTTATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| | ||| || |||| || ||||||||| || ||||| || | Sbjct 20513 CCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGAT 20454 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||||| || || || || || || || | ||||||| | || Sbjct 20453 AGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGA 20394 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| || || || ||||| || ||||| || | || || | ||| || Sbjct 20393 ATACCTTCTTTATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACC 20334 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || ||||| ||||| || |||||||| Sbjct 20333 TCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || |||||||| | ||||| || || ||||||| ||||| || || || Sbjct 19794 TTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAA 19735 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| || ||| | || || ||||||||||| || ||||| ||||| || || Sbjct 19734 AATGAGACGTTGCTGATCAGGAGGTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATT 19675 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || || || || || || | || || || || || || || ||||| || Sbjct 19674 TTCAATTGTGTCACTGGACTCAACCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTAC 19615 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 19614 AAAGATCTGCAT 19603 Score = 114 bits (126), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || ||||| || | || | || |||||| ||||| ||||||| Sbjct 19149 CATG-CCACCTCTCAGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGT 19091 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | | || ||||| ||||| | ||| || || || || ||||| | ||| || | Sbjct 19090 CTGACAATGTACGTCCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAG 19031 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||||||||||||||||| ||||| | || || |||||||| | || || | | Sbjct 19030 GAGGGATTCCTTCTTTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCT 18971 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || || | ||||| ||||| || || || || || || || ||||||||| Sbjct 18970 CAACCTCTAATGTGATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCATT 18918 Score = 100 bits (110), Expect = 7e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 |||||||| | || |||||| || || || ||||| | | || || || ||||| Sbjct 20039 ACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTACGACCATCTTCA 19980 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || || || || | | ||||||| ||| ||||||||||| || || Sbjct 19979 AGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGA 19920 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 ||||| ||||| || ||||| || | ||| || | |||||||| | || || || ||| Sbjct 19919 ATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGTAATAGTTTTC 19860 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | ||||| || || ||||||||| Sbjct 19859 CCAGTTAATGTCTTCACAAAAATCTGCATT 19830 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || |||| | || | ||| | || ||| |||||||| ||||| || | Sbjct 22640 TCCACCACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGA 22581 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || | || ||||| | || || || || ||||| |||||||||||| | || Sbjct 22580 CAAGGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGG 22521 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || |||||||||||||| || ||||| || || || || | ||| || | ||| || Sbjct 22520 AATGCCCTCTTTATCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTCAAC 22461 Query 288426 TTCGAGCGTGATCGTCTTCCC 288446 ||| || || || || || || Sbjct 22460 TTCTAGAGTAATAGTTTTACC 22440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177359834319892