Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_009935.1 Length=43200 Score E Sequences producing significant alignments: (Bits) Value seq3139 132 1e-26 >seq3139 Length=44538 Score = 132 bits (146), Expect = 1e-26 Identities = 373/572 (65%), Gaps = 23/572 (4%) Strand=Plus/Plus Query 39569 GGAGACCGTACCTCGGCCACCAGCTTCGACGTGAACTGGGCCTTGAAGGGCGTTGAGAAG 39628 || |||||||| ||| | | | || ||||| |||| | | ||||| | | || || Sbjct 8704 GGTGACCGTACATCGTACGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAA 8763 Query 39629 TCGGC----GTCGATCAACTGCATCGGGATCACCGCAGCCCTCCAGGGCTACCGTGCCGA 39684 || || || | || ||| | || ||||||||| || | ||||| | ||||| || Sbjct 8764 TCCGCCAGCGTGG--CA--TGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGA 8819 Query 39685 CATCCTGATCCCCGACGATATCGAGACCACTAAGAACGGCCTGACCGCCACCGAGCGGGC 39744 | ||||| || || ||||||||||| || || ||||| ||||| || || | || | Sbjct 8820 TCTGCTGATTCCAGATGATATCGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGA 8879 Query 39745 CAAGCTGACGCGGCAGTCGCAGGAGTTCACCTCAATCTGCACCCACGGGAAGATTCTCTA 39804 |||| | || || |||| ||| || | || || |||||||||| ||| || Sbjct 8880 AGTGCTGCTGTTGCGCTCCAAGGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTA 8939 Query 39805 CCTGGGCACGCCGCAGTCCCGCGAGTCCATCTACAACGGCCTCCCTGCGCGGGGCTTCCT 39864 |||||| || |||||| || || |||||||| ||| | ||||| ||||| Sbjct 8940 CCTGGGGACACCGCAGACCAAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGA 8999 Query 39865 CATGCGCATCTGGCCGGGCCGCTTCCCGACCCTGGACGAGCAGGAGCGCTATGGCGACTG 39924 || ||| | ||||| || ||| | || ||| | || || |||| || || | || Sbjct 9000 GATTCGCGTATGGCCTGGTCGCGTACCTACCGTAGAAGAAGAGGAACGTTACGCCGGAAC 9059 Query 39925 GCTGGCACCCTCCATCCTGGAACGCATTGCGCGTCTGGAGGAGCGGGGCCACAACCCCCG 39984 |||| || || | ||| ||| ||| ||| || | || Sbjct 9060 ATTGGCTCCGATGATTCAGGAGATGATT----------CGGAACGGCGC-----GGCGCG 9104 Query 39985 CACGGGCAAAGGCCTGGACGGGACCCGTGGCTGGGCCGCTGACCCGCAGCGCTACAACGA 40044 || || ||||||||||| | ||| ||| || | ||||| ||| |||| || Sbjct 9105 TACAGGTTTCGGCCTGGACGGCAACCGCGGCGAGGTAACCGACCCCATGCGTTACACGGA 9164 Query 40045 AGAGGACCTGATCGACAAGGAACTCGACCAGGGCGCCGAGGGCTTCCAGCTCCAGTACAT 40104 ||| || | |||| ||||||||| ||| ||| | ||||| |||||| | |||||||| Sbjct 9165 AGATGATTTAATCGGCAAGGAACTTGACTTCGGCCCTGAGGGGTTCCAGTTGCAGTACAT 9224 Query 40105 GCTGGACACCAGCCTCGCCGACGAACAGCGTA 40136 |||||| || || || || | |||||||| Sbjct 9225 GCTGGATACGTCACTAGCTGATGCACAGCGTA 9256 Score = 104 bits (114), Expect = 6e-18 Identities = 210/303 (69%), Gaps = 14/303 (5%) Strand=Plus/Plus Query 13791 CTGCCGGG--GCGTTCAGCG--AGATGGGGTCGGACGGCAACTGGCGCCAGTACCGTCGG 13846 |||||||| || | || || |||||| | |||| | ||||| ||| ||||| Sbjct 27400 CTGCCGGGCAGCATCCACCGTGAGATGGCGGACAACGGTACATGGCGTGTGTATCGTCGT 27459 Query 13847 GGCTACTGGCAGGCGCCGGGCGGCACATGCTACAGCTTCCGCCAGCAGGAGCGCTGGGAC 13906 || |||| | | |||| || ||||| ||||||||||| ||||| || || || | | Sbjct 27460 GGGTACTACCGTGGGCCGAGCACAACATGTTACAGCTTCCGTCAGCACGA-CG-TGTGGC 27517 Query 13907 AAGGAGCAGCGTAAGACGGTCATGGACTTCAAGGACACGCAGATCGCCAACTACTGGAAC 13966 | | ||||| |||||||||| ||| || ||||| || |||||| | Sbjct 27518 GTGATG----GTAAGCAAGTCATGGACTACAAACCAACCCAGATGGCTAACTACCCATTC 27573 Query 13967 CAGGGCGAGGCTGGGTTCATGATGACCGTGAGCGTGGGGCGCATCTTCCGTTGG--ATGC 14024 ||||| ||||||||||||||||||| ||| || ||||||| |||| ||| ||| | | Sbjct 27574 CAGGGTGAGGCTGGGTTCATGATGAGCGTAAGTATGGGGCGTATCTGCCGCTGGTTAATC 27633 Query 14025 TGCATCGCCCAGGATTCATGGTCACCGAGTTCCTGATCAACAACGTACACGATGCCGTGT 14084 | | | | || | |||| || | || |||| ||||||||||||||||| | || Sbjct 27634 AGTAAAG-ACTGGTTCGATGGGCA-GGTGTGTTTGATTAACAACGTACACGATGCAGCGT 27691 Query 14085 ACA 14087 ||| Sbjct 27692 ACA 27694 Score = 93.3 bits (102), Expect = 1e-14 Identities = 199/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 16668 GCTGTGGGCCGAGCAGGGCAAGATGTGCCCGATCTGCGGCAAGCCCATCGATATCAGCGT 16727 ||||| ||| | ||||| || | ||| | |||| || ||||| || ||| |||| | Sbjct 30738 GCTGTATGCCCAACAGGGTAATGTATGCGCCCTCTGTGGTAAGCCTATTGATTTCAGTAT 30797 Query 16728 GAAGGGCGAGGCCGTGATGGATCACGACCACGAGACGGGGCTGGTGCGGGGCGTCCTGCA 16787 ||||||||||| || || |||||||| || || ||| | || || | ||||| Sbjct 30798 CAAGGGCGAGGCAGTCGCCGACCACGACCATATTACAGGTCTGATACGTGGTGCACTGCA 30857 Query 16788 CCGATCCTGCAACACCGCCGAAGGCAAGATCACGAATGCGGCAGGCTCCTGGGGCTGC-A 16846 ||| |||||||| | || || || ||| | | || || || ||| |||||| ||| | Sbjct 30858 CCGCTCCTGCAATGCAGCAGAGGGTAAGGTGGCTAACGCCGCCGGCCGCTGGGG-TGCGA 30916 Query 16847 AGTCGATGCGCTACGCCGACATCATCCCCTTCCTGCACTCCCTCCTGGCGTACTTGGAGG 16906 || |||| |||| || |||| | || | ||| | ||| ||||||||| || Sbjct 30917 AGAGTATGCAGTACGACGCCATCCTGCCTTGGCTGGAGAACCTGCTGGCGTACCTGCGCA 30976 Query 16907 GGCCGAAGCATCC-GCTGATCTACCCCCTACACAAGACCGACGAGGAGAAGC 16957 |||| |||| || | || ||||| ||||||||| ||| ||| ||| Sbjct 30977 AGCCG-AGCACCCAGTACATTTACCCAACCCACAAGACCACCGATGAGCAGC 31027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137869401357016