Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_009936.1 Length=41593 Score E Sequences producing significant alignments: (Bits) Value seq3139 131 4e-26 >seq3139 Length=44538 Score = 131 bits (144), Expect = 4e-26 Identities = 309/461 (67%), Gaps = 17/461 (4%) Strand=Plus/Plus Query 13942 ATCATCCACCACAGCTTGAACCTTTGCGCCACCGCCACTGGTCGCCTGTCCTCCTCGTAC 14001 ||| | ||||||||| ||||| || ||| || | ||| || ||| || || Sbjct 26875 ATCGTGCACCACAGCCTGAACGTTACCGCTACGGTGACTACGCGACTGAGTTCAAGCAAC 26934 Query 14002 CCGAACCTCCAGAACCTCCCGCGAGACGGCACCAGCCGAGTCAAGGAGATGTTCGAGTCC 14061 |||||||||||||||||||| ||||| || || | || ||| |||||||| | Sbjct 26935 CCGAACCTCCAGAACCTCCCACGAGATGGGACGTCCAAGGTTAAGCAGATGTTCACCAGC 26994 Query 14062 CGCTTCGGGACTGCCGGGCGGATCATCGAAGTGGACTACTCAGCCCTGGAAGTGGTGATG 14121 || ||||| ||| || ||||| || ||||| ||||| || |||||||| || ||| Sbjct 26995 CGATTCGGTGAGAACGGTCGCATCATTGAGGTGGATTACTCCGCACTGGAAGTTGTAATG 27054 Query 14122 CTGGCTGCGCTCAGCGGCGACGAGAACCTGCTGGAGCAGCTCGTCAAG--GGCACGGACA 14179 || |||| | | | || | || |||||| || | | || | | ||| |||| Sbjct 27055 CTCTGTGCGATGACACGGGATATGGACTTGCTGGCGCTGTT--ACAGGCTGACACTGACA 27112 Query 14180 TGCACTGCCTGCGTCTGG----CCGCGAAGCTCGGTGAACCCTACGAGGAGGTGCTGCAC 14235 |||||||| || |||| |||| || || ||| | |||||||| | || || Sbjct 27113 TGCACTGCTATCGACTGGCGTACCGC----CTGGGCGAATCGTACGAGGATG---TGTAC 27165 Query 14236 AAGGCAGT-CGAGAACCAGGCGCATCCGGAGCACAAGCGGTACAAGCAGATGCGGACGGA 14294 | | ||| | | ||| | | || |||||||||||| ||||||||||||||| ||||| Sbjct 27166 GA-GAAGTGCCACAACGAAGAACACCCGGAGCACAAGAAGTACAAGCAGATGCGAACGGA 27224 Query 14295 CATCAAGCCACCTAGCTTCGCCGCTCAGTACGGGGCCAGTGCCGAGGGTATCGCATACGC 14354 || ||||| | || || | |||||||| || | || | || | || | | Sbjct 27225 TATTAAGCCGCTGTCATTTGCTGACCAGTACGGTGCTACGGCAGCCGGCCTGGCGTTCAA 27284 Query 14355 CACCGGTGTATCTGTCGAGTACGCCAAGGAGTTCCTGGAGA 14395 ||||||| ||| | |||| ||| | || |||| || || Sbjct 27285 CACCGGTTGTTCTATTGAGTTCGCTGAAGAATTCCAGGCGA 27325 Score = 102 bits (112), Expect = 2e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 17332 CTCTGTGGTAAGCCGATTGACTACAGCATCCCACGGGAAGCGGTGGTCGATCACGACCAC 17391 |||||||||||||| ||||| | ||| ||| | || || || | ||| |||||||| Sbjct 30769 CTCTGTGGTAAGCCTATTGATTTCAGTATCAAGGGCGAGGCAGTCGCCGACCACGACCAT 30828 Query 17392 GATACAGGCGAAATCCGGGGCGTCCTGCACCGATCCTGTAATGCGGCGGAAGGCAAGGTC 17451 |||||| || || || | |||||||| ||||| ||||| || || || ||||| Sbjct 30829 ATTACAGGTCTGATACGTGGTGCACTGCACCGCTCCTGCAATGCAGCAGAGGGTAAGGTG 30888 Query 17452 AGCAACGCAGCCGGTAGGTGGGGTGCCAAGAGCACTAGCTACGCCGATATCGTGCCGTTC 17511 ||||| ||||| | |||||||| ||||| | |||| || ||| |||| | Sbjct 30889 GCTAACGCCGCCGGCCGCTGGGGTGCGAAGAGTATGCAGTACGACGCCATCCTGCCTTGG 30948 Query 17512 CTGGAGAATCTGGTCCAGTACCTG 17535 |||||||| ||| | ||||||| Sbjct 30949 CTGGAGAACCTGCTGGCGTACCTG 30972 Score = 84.2 bits (92), Expect = 6e-12 Identities = 196/296 (66%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 38292 GACGTGCACTGGTCCTTGAAGGGTGTGGACAAGTCCGCATCTGTGAACTGTCTGGGTATC 38351 ||||| ||||| | ||||| |||| || ||||| ||| || | |||||| Sbjct 8731 GACGTACACTGCGACCTGAAGCCCCTGGATAAATCCGCCAGCGTGGCATGCGTAGGTATC 8790 Query 38352 ACCTCGTCCCTACAAGGGTATCGTGGCGACCTGTTGATCCCGGACGATATCGAGACCACG 38411 ||| | ||| | || || | |||| || ||| |||| || || ||||||||||| ||| Sbjct 8791 ACCGCATCCTTGCAGGGTAAGCGTGCTGATCTGCTGATTCCAGATGATATCGAGACTACG 8850 Query 38412 AAGAACGGCCTCACCGCCACCGAGCGGGCGAAGCTCATCACGCTCTCGAAGGAGTTCACC 38471 || ||||| || || || || | || | ||| | || ||| ||||| ||| || Sbjct 8851 AACAACGGTCTGACGGCTACAAACCGTGAAGTGCTGCTGTTGCGCTCCAAGGACTTCTCC 8910 Query 38472 TCTATTGTGGCCGACAGGAACGGTCGCATCTTGTACCTGGGCACACCGCAAACGCGGGAG 38531 | ||| | || |||| || |||||||||| |||||||| || || Sbjct 8911 GCGATTAATACGCACGGGAAGACTC------TGTACCTGGGGACACCGCAGACCAAAGAC 8964 Query 38532 TCCATCTACAACACCCTGCCTGGCCGTGGCTTCACTGTCCGCGTATGGCCGGGACG 38587 |||||||| |||||| | | |||||||| | ||||||||||| || || Sbjct 8965 AGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATTCGCGTATGGCCTGGTCG 9020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132736272030740