Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2770 116 4e-21 seq87018 109 6e-19 seq24654 102 9e-17 seq110060 100 3e-16 seq106930 100 3e-16 seq13973 98.7 1e-15 seq13897 98.7 1e-15 seq23639 96.9 4e-15 seq302 96.9 4e-15 seq17096 95.1 1e-14 seq7170 95.1 1e-14 seq1209 95.1 1e-14 seq780 91.5 2e-13 seq3042 84.2 2e-11 >seq2770 Length=41231 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||||||| | ||| ||||| |||| ||| || |||||||| || || || | Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || ||| | || |||||||| |||||||| || ||||| || ||||| || | || Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || || || || ||| |||||| ||| | | | | ||||| || || || || Sbjct 19709 ATGCCTTCTTTATCT-TGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAAC 19651 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || || ||||| || || || |||||||||||||| ||||| Sbjct 19650 CTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| ||||| |||| |||||| || | || ||||| ||||||||||| ||| Sbjct 20249 TCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAT 20190 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | || ||| || || | ||| | | || ||| | ||| |||| | || | | Sbjct 20189 ATCAATCTCTGTTGATCAGGTGGGATTC-CTTCTTTATCTTGAATTTTAGCCTTTACGTT 20131 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||||| | ||| || || | || || || || || || || |||||||| Sbjct 20130 TTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTTTAC 20071 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 20070 AAAGATTTGCAT 20059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || ||||||||||| || || | ||||| || | || || || || ||||| || || Sbjct 19565 TCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAG 19506 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | | |||||| |||| || | | ||||| || ||| |||||| || | | | Sbjct 19505 ATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCT-TGAATTTTTGCTTTAACATT 19447 Query 42138 GCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || | ||| || || | ||| |||||||| || |||| || || || Sbjct 19446 TTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGTTTTAAC 19387 Query 42197 AAAGATTTGCATT 42209 |||||||||||| Sbjct 19386 GAAGATTTGCATT 19374 >seq87018 Length=3116 Score = 109 bits (120), Expect = 6e-19 Identities = 91/109 (83%), Gaps = 3/109 (3%) Strand=Plus/Minus Query 56973 AGTTAACAACAAATTAACGTT-TATGAAAAATTT--TCTCCTCGGCAAGAAATCGAACCC 57029 |||| | || |||||||||| || |||||| | ||||| |||| | |||||||||| Sbjct 783 AGTTGATAATTAATTAACGTTATAAGAAAAAATAGCTCTCCCCGGCGGGGAATCGAACCC 724 Query 57030 TGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 ||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 723 CGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGA 675 >seq24654 Length=27924 Score = 102 bits (112), Expect = 9e-17 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 56993 TTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052 ||| |||||| ||||| |||| | |||||||||| ||||||||||||||||||||| Sbjct 12313 TTAAGAAAAAAGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 12254 Query 57053 CATACTCACCACTATACTACCGAGGA 57078 ||||| ||||||||||||||||||| Sbjct 12253 GATACTTACCACTATACTACCGAGGA 12228 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/83 (87%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 56998 AAAAATTT--TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 21456 AAAAATATGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 21397 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 21396 ACTTACCACTATACTACCGAGGA 21374 >seq110060 Length=2164 Score = 100 bits (110), Expect = 3e-16 Identities = 90/111 (81%), Gaps = 4/111 (4%) Strand=Plus/Minus Query 56973 AGTTAACAACAAATTAACGTT-TATGAAAAATTTT---CTCCTCGGCAAGAAATCGAACC 57028 |||| | || ||||||| || || |||||| || |||| |||| | ||||||||| Sbjct 1936 AGTTGATAATTAATTAACTTTATAAGAAAAAAATTGCTCTCCCCGGCGGGGAATCGAACC 1877 Query 57029 CTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 | ||||||||||||||||||||| ||||| ||||||||| |||||||||| Sbjct 1876 CCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATATTACCGAGGAT 1826 >seq106930 Length=3113 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATTT-TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||||||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 9 AAAAATTGCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 68 Query 57057 CTCACCACTATACTACCGAGGA 57078 || ||||||||||||||||||| Sbjct 69 CTTACCACTATACTACCGAGGA 90 >seq13973 Length=10150 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 9629 AAAACATCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9688 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||||||| Sbjct 9689 TTACCACTATACTACCGAGGAT 9710 >seq13897 Length=14253 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 4554 AAAAATT--CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4611 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 4612 TTACCACTATACTACCGAGGA 4632 >seq23639 Length=9982 Score = 96.9 bits (106), Expect = 4e-15 Identities = 72/83 (87%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| | | ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 5893 AAAAATGTACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 5834 Query 57057 CTCACCACTATACTACCGAGGAT 57079 || |||||||||||||||||||| Sbjct 5833 CTTACCACTATACTACCGAGGAT 5811 >seq302 Length=194071 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 185829 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 185888 Query 57066 ATACTACCGAGGA 57078 ||||||||||||| Sbjct 185889 ATACTACCGAGGA 185901 >seq17096 Length=34778 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 11221 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 11162 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 11161 TACTACCGAGGA 11150 >seq7170 Length=19467 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||| || || ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 11801 AAAAGTTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 11860 Query 57057 CTCACCACTATACTACCGAGGA 57078 || ||||||||||||||||||| Sbjct 11861 CTGACCACTATACTACCGAGGA 11882 >seq1209 Length=65799 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | ||||| ||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 50224 AAAACATCTCTCCCTGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50165 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||||||| Sbjct 50164 TTACCACTATACTACCGAGGAT 50143 >seq780 Length=63505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 56/60 (93%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 31821 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGAT 31880 >seq3042 Length=24224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| ||| | ||||||||| ||||||||| ||||||||||| ||||| ||||||| Sbjct 14036 CTCCCCGGAGGGGAATCGAACCGCGGTCTCCCGTGTGACAGGCGGGGATACTTACCACTA 13977 Query 57067 TACTACCGAGGA--TTGAATATA 57087 |||||||||||| ||||| ||| Sbjct 13976 TACTACCGAGGACTTTGAAAATA 13954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542181958649760