Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2770 150 2e-31 seq16555 87.8 2e-12 >seq2770 Length=41231 Score = 150 bits (166), Expect = 2e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 || ||||| || ||||||| || |||||||||||||| || || |||| | ||||| Sbjct 19592 AACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGA 19533 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | |||||||| || || || ||| | || | || |||||| ||||||||||||||||| Sbjct 19532 CCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCC 19473 Query 64346 TTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGT 64404 || ||||| | |||||||||| ||| || | || |||| || || ||||||| || Sbjct 19472 TTATCTTG-AATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGT 19414 Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | ||| || || || || ||||| ||||| ||||||||| Sbjct 19413 AATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCATT 19374 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| ||||| ||||| | || ||||| |||||||| || || |||| | || | | Sbjct 20958 TCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTGCC 20899 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||||||||| || || ||| |||| || |||||||| || |||||||| |||||||| Sbjct 20898 ATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCTTT 20839 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| ||||| ||||||| || | ||||||| || || || |||| ||||| Sbjct 20838 ATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTTAT 20779 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| || |||||||| |||||||| Sbjct 20778 TGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || || |||| || ||||||||||||||||| ||||||| Sbjct 20514 ACCACCTCTCAATCTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATCTGA 20455 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| |||||||| || ||| ||||||| | ||| || || ||||| Sbjct 20454 TAGTGTGCGACCATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGG 20395 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| |||||||| ||||| | | || ||||| ||| || | ||| |||| | |||| Sbjct 20394 AATACCTTCTTTATCTTG-AATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCA 20336 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | |||||| || || | |||||| || ||||| ||||| Sbjct 20335 CCTCAAGTGTAATGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||||||||| || ||||| || | | ||| || | ||| Sbjct 21182 AGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCT 21123 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| || || ||| | ||||||| ||| || || || |||||||||||||| ||| Sbjct 21122 TCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCT 21063 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||||| || | ||||||| | || ||||||| |||| ||| Sbjct 21062 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTT 21003 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||| || || ||||||||||| Sbjct 21002 TTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 125 bits (138), Expect = 7e-24 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 ||||| || | || | ||||||||||| || ||||| || |||| | || || | Sbjct 19133 CTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGTCCA 19074 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| || |||||||| ||| |||| |||| ||||||||| ||||| ||||||||||| Sbjct 19073 TCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTA 19014 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || ||||| ||| ||| || | || |||| | || || |||| || | | Sbjct 19013 TCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTGATG 18954 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT-TTAATAATGATACACTTAA 64463 |||||||| || | ||||| || || || |||||| || ||| ||| | |||| Sbjct 18953 GTCTTGCCAGTAAGTGTTTTCACAAAGATCTGCATTGTTTCTAAAAATAGAGTTAA 18898 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||| || |||| | || ||| | ||||| ||||| || || Sbjct 19799 GTAGATTCTTTTTGAATGTTATAGTCTGAAAGCGTACGCCCATCTTCTAGCTGTTTACCA 19740 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| || ||||| || ||||| || |||||||| ||||| |||||| ||| Sbjct 19739 GCAAAAATGAGACGTTGCTGATCAGGAGGTATGCCTTCTTTATCTTGAATTTTTGCTTTT 19680 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||| |||| || || || |||| |||| || || || || | || Sbjct 19679 ACATTTTCAATTGTGTCACTGGACTCAACCTCTAATGTTATTGTTTTACCAGTAAGTGTC 19620 Query 64427 TTTACGAAAATTTGCAT 64443 ||||| || || ||||| Sbjct 19619 TTTACAAAGATCTGCAT 19603 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || |||||||| ||||||||||| || | | || || | |||||| Sbjct 20039 ACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTACGACCATCTTCA 19980 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| || ||| |||| | || ||| || || || |||||||||||||| ||||| Sbjct 19979 AGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTG- 19921 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| ||| || | |||||||| | || ||||||| || | || || Sbjct 19920 AATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGTAATAGTTTT 19861 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || || || || || ||||| |||||| Sbjct 19860 CCCAGTTAATGTCTTCACAAAAATCTGCATT 19830 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | || ||||||||||| ||||| || |||| | || | | ||||| Sbjct 20723 ACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATCTTCT 20664 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||| || ||| | || || || ||||| || |||||||| |||||||| ||||| Sbjct 20663 AATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATCTTG- 20605 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||| ||||| ||| || | ||||||| | || ||||| | ||||| || || Sbjct 20604 AATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGTTTT 20545 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||||||| ||||| |||||||| Sbjct 20544 ACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||||||||| ||||||| || ||||||||||| || |||||||||| | || | | Sbjct 21527 TCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCTGATAATGTTCTACC 21468 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 || || || || || || ||| |||| |||| |||||| || || ||||| || ||||| Sbjct 21467 ATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCTTT 21408 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| |||||| ||| ||| || | ||||||| | || ||||||| ||| | Sbjct 21407 GTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCAACTTCTAAAGTAAT 21348 Query 64408 GGTCTTGCCGGTCAA 64422 ||||| || || || Sbjct 21347 AGTCTTTCCTGTAAA 21333 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || ||||| |||| || ||||| |||||||||||||| || | | || || | ||| Sbjct 20270 AGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCT 20211 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| | || | | ||| || || || || ||||||||||| ||| Sbjct 20210 TCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATCT 20151 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| |||||| || | || || | | || ||||||| |||| ||| Sbjct 20150 TGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTC 20091 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||| ||||| || |||||||| Sbjct 20090 TTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 >seq16555 Length=11409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 154869 TCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGC 154928 || |||||||| | ||||||||| | || || || |||||||| || | ||| || Sbjct 11211 TCAGGACACATAAGACTCCACATTTCATCTTTTTCAACTCGTTTCATGAAAAGATCTGGA 11152 Query 154929 ACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTT 154988 | |||||| || || |||||||| | ||| || ||||| || | ||| |||| Sbjct 11151 ATCCACAAGGCATAGAACAAATCTCTTGCCCGTTGCTCTTCTTTTCCTGTATTTTTCTTT 11092 Query 154989 AAATTCAAAAAAT-CATATATGTCGGCGTGCCACGGCTCTAAATA 155032 || ||||| |||| || |||| || || ||||| ||||||||||| Sbjct 11091 AA-TTCAAGAAATTCAAATATATCAGCATGCCAAGGCTCTAAATA 11048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498696636554160