Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_010326.1 Length=43548 Score E Sequences producing significant alignments: (Bits) Value seq3139 114 4e-21 >seq3139 Length=44538 Score = 114 bits (126), Expect = 4e-21 Identities = 324/497 (65%), Gaps = 23/497 (5%) Strand=Plus/Plus Query 39685 TGCATCGGGATCACCGCCGCCCTCCAGGGCTACCGGGCTGACATCCTGATCCCTGACGAC 39744 ||| | || |||||||| || | ||||| | || ||||| | ||||| || || || Sbjct 8779 TGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTGCTGATTCCAGATGAT 8838 Query 39745 ATCGAGACCACGAAGAACGGCCTCACCGCCACCGAGCGGGCGAAGCTGACACGGCAGTCG 39804 |||||||| ||||| ||||| || || || || | || | |||| || || Sbjct 8839 ATCGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTGCTGCTGTTGCGCTCC 8898 Query 39805 CAGGAGTTCACCTCTATCTGTACCCACGGTAAGATTCTCTACCTGGGTACGCCGCAGTCC 39864 |||| ||| || | || ||| ||||| |||| ||| |||||||| || |||||| || Sbjct 8899 AAGGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTGGGGACACCGCAGACC 8958 Query 39865 CGCGAATCGATCTACAACGGCCTACCCGCGCGTGGCTTCCTGATGCGTATCTGGCCGGGC 39924 || |||||||| ||| | ||||||||||| ||| || | ||||| || Sbjct 8959 AAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATTCGCGTATGGCCTGGT 9018 Query 39925 CGGTTCCCGACCCTGGACGAGCAGGCGCGTTATGGCG----ACTGGCTCGCACCCTCTAT 39980 || | || ||| | || || ||| ||||| | || | ||||| || || Sbjct 9019 CGCGTACCTACCGTAGAAGAAGAGGAACGTTACGCCGGAACATTGGCT----CCGATGAT 9074 Query 39981 CCTGGCGCGCATCGCTCGCCTGGAGGAGAAAGGCCACAACCCGCGCACCGGCAAGGGCCT 40040 | || | || ||| ||| || | |||| || || ||||| Sbjct 9075 TCAGGAG---ATGATTCG---------GAACGG---CGCGGCGCGTACAGGTTTCGGCCT 9119 Query 40041 CGACGGCACCCGTGGCTGGGCGGCTGACCCGCAGCGCTACAACGAAGAAGACCTGCTCGA 40100 ||||||| ||| ||| || | ||||| ||| |||| ||||| || | ||| Sbjct 9120 GGACGGCAACCGCGGCGAGGTAACCGACCCCATGCGTTACACGGAAGATGATTTAATCGG 9179 Query 40101 CAAGGAACTGGACCAAGGCCCCGAGGGCTTCCAGTTGCAATACATGCTGGACACCAGTCT 40160 ||||||||| ||| ||||| ||||| ||||||||||| ||||||||||| || || Sbjct 9180 CAAGGAACTTGACTTCGGCCCTGAGGGGTTCCAGTTGCAGTACATGCTGGATACGTCACT 9239 Query 40161 CGCCGACGAGCAGCGTA 40177 || || | ||||||| Sbjct 9240 AGCTGATGCACAGCGTA 9256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138980993768680