Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2770 125 7e-24 >seq2770 Length=41231 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| || || | | || || ||||||||||| ||||| Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGAA 19770 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || |||||||| | | | || ||||| || || || |||||| Sbjct 19769 AGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGGT 19710 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| |||||| ||||| | ||| | ||||| | ||||| || Sbjct 19709 ATGCCTTCTTTATCT-TGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAAC 19651 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||||||||| || || |||||||| |||||||| Sbjct 19650 CTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||||||||| || |||||| || || ||||| ||||| | | Sbjct 20252 GATTCCTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCA 20193 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 | || | | |||||| || || || || |||||||| || ||| |||| | |||| Sbjct 20192 AATATCAATCTCTGTTGATCAGGTGGGATTCCTTCTTTATC-TTGAATTTTAGCCTTTAC 20134 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | ||||||| | | || || || | || | || |||||||| ||||| || Sbjct 20133 GTTTTCAATGGTGTCGCTAGGTTCAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTT 20074 Query 138600 TACAAAAATCTGCAT 138614 |||||| || ||||| Sbjct 20073 TACAAAGATTTGCAT 20059 Score = 100 bits (110), Expect = 3e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | |||| || || ||||| ||||| || | |||||| ||||| Sbjct 19356 AACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTC 19297 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||||| ||||| | | | |||| ||| ||||| || || || |||||||| ||||| | Sbjct 19296 AAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT-T 19238 Query 138525 GATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| | ||||| | || | |||||| | || || || | || | |||| Sbjct 19237 GAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTT 19178 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | ||||| | ||||| || |||||||||||| Sbjct 19177 TGCCAGTTAAGGTTTTAACGAAAATCTGCATG 19146 Score = 100 bits (110), Expect = 3e-16 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478 || || ||||||||||| || || | ||||| |||| || || || || ||||| | Sbjct 20480 GATTCTTTTTGAATGTTATAATC--TGATAGTGTGCGACCATCTTCTAGCTGCTTACCAG 20423 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | | || || | |||||| || ||||| ||||||||||| || ||| | || | ||| Sbjct 20422 CAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTATCT-TGAATCTTAGCTTTG 20364 Query 138539 AT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | ||| | ||||| | | |||||||| | || | || |||||||| |||||| Sbjct 20363 ACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGTT 20304 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 20303 TTGACAAAAATCTGCAT 20287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGT 138460 |||||||||||||| |||| || ||||| ||||| ||||| | ||| | || | | Sbjct 20727 CAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCA-T 20669 Query 138461 CCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGT 138520 | || | ||| ||||| | | |||| ||||| || || || ||||| || |||||||| | Sbjct 20668 CTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTAT 20609 Query 138521 CGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 | ||| |||| | ||||| | ||| | || || | | || || || | || | Sbjct 20608 C-TTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATT 20550 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||| | |||||| || || || ||||| Sbjct 20549 GTTTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||| || ||||| || | ||| | | || || || |||||||||||||| | | Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGAT 19998 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || || || ||||| | | | |||| | |||||| || || || Sbjct 19997 AAT-GTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGG 19939 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| |||| | ||||| | ||| | || || | | ||| | Sbjct 19938 AATTCCTTCTTTGTCT-TGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTA 19880 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| ||||| | || || |||||||||||||| Sbjct 19879 CTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478 || || |||||||| || ||||| | |||| |||| || || ||||||||||| | Sbjct 19568 GATTCTTTTTGAATATTATAGTC--TGATAGAGTGCGACCATCTTCAAGTTGTTTACCTG 19511 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||||| | ||| || || ||||| || ||||| || || ||| |||||| |||| Sbjct 19510 CAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCT-TGAATTTTTGCTTTA 19452 Query 138539 AT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | ||| | ||||| | | || || || | ||| | ||||||||||| | ||| Sbjct 19451 ACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGTT 19392 Query 138598 TTTACAAAAATCTGCAT 138614 || || || || ||||| Sbjct 19391 TTAACGAAGATTTGCAT 19375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495320655250080