Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2770 131 1e-25 >seq2770 Length=41231 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || || | || | |||||||||||| |||||||| || || || || Sbjct 19601 CCACCTCTTAACCTAAGTACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAT 19542 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | |||||| || || | || || | ||| || ||| ||| Sbjct 19541 AGAGTGCGACCATCTTCAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGA 19482 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || |||||| ||| ||| ||||||| || || || |||||| Sbjct 19481 ATTCCTTCCTTATCTTGAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACT 19422 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| |||||||||||||| || | ||||| || || |||||||| Sbjct 19421 TCTAACGTAATGGTTTTACCAGTTAATGTTTTAACGAAGATTTGCAT 19375 Score = 125 bits (138), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | || ||||||||||| | || || |||||||| ||||| || || || Sbjct 20741 CCACCACGAAGCCTCAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTC--TG 20684 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || | || | ||||||||||| || ||||| | || | ||| || || || | Sbjct 20683 ATAAAGTCCTGCCATCTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAG 20624 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| || || ||||||| ||| ||| ||||||| ||||| || ||||| Sbjct 20623 GAATCCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTA 20564 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | || || |||||||| || | |||||| || || ||||||||| Sbjct 20563 CTTCAAGAGTTATTGTTTTACCAGTTAAAGTTTTAACGAATATTTGCATA 20514 Score = 118 bits (130), Expect = 8e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || |||||||| || ||||| || || ||| | ||||||| ||| Sbjct 21173 TGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCGACCATCTTCTAGCTGT 21114 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || |||| | | |||||| || |||||||||||| || || ||| || Sbjct 21113 TTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATCTTA 21054 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 |||||| |||| |||||||| ||| || || ||||| || |||||||| || || Sbjct 21053 GCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAATGTTATGGTTTTCCCAGTA 20994 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 ||||| || |||||||||||||| Sbjct 20993 AGAGTCTTAACAAAAATTTGCAT 20971 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || || || || | ||| | ||||| ||||| || |||||||| || | Sbjct 20057 CCTCCTCTCAGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCA--G 20000 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| || | ||||| | || || ||||| | || || | |||||| || || Sbjct 19999 ATAATGTACGACCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTG 19940 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||| ||||| |||||| ||| ||| |||| || ||||| ||| |||| Sbjct 19939 GAATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTA 19880 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | ||||||||||| ||||| || || | || || |||||||| ||||| Sbjct 19879 CTTCTAAGGTAATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | || | ||||||||||||||| || ||||| || || |||||||| Sbjct 19373 CCACCTCTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAA 19314 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | || || | ||| || ||||| | || ||||| ||||| || |||| Sbjct 19313 AGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGA 19254 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| |||||| ||| || | || || || || || | ||| || Sbjct 19253 ATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGTTCAACT 19194 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || || ||||| || || | ||||| || ||||| ||||| Sbjct 19193 TCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 111 bits (122), Expect = 1e-19 Identities = 150/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| |||| | ||| | || | |||||| ||||| ||||||||||| |||||||| Sbjct 21540 TGCCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATC-- 21483 Query 15008 TGAGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 ||| ||| ||| | || |||| |||||| ||||| | || | | ||| || || Sbjct 21482 TGATAATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGG 21423 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 |||||| || || ||||| |||||| || ||| ||||||||||||| ||| || Sbjct 21422 TGGAATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTC 21363 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||||| ||||| || || ||||| Sbjct 21362 AACTTCTAAAGTAATAGTCTTTCCTGT 21336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356730741482990