Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2770 104 2e-17 >seq2770 Length=41231 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || | ||| | ||| ||||| || | ||||| ||||||||||| || || || Sbjct 19830 TCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTGA 19771 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| || ||| ||||||||||| ||||| | || | || |||||||| ||||| Sbjct 19770 AAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAGG 19711 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 |||||| || || | | ||| ||| ||| || | | ||| | ||||| | ||| | Sbjct 19710 TATGCCTTCTTTAT-CTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | ||||| || || || || |||||||| |||||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | || || ||||| |||||||||||||| | || || ||| || Sbjct 19355 ACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTCA 19296 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || ||||| | || || || || ||||| || || || || |||||||| || Sbjct 19295 AGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT-TG 19237 Query 127025 ATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 | ||| |||| | ||| | ||| |||||| | || ||||| | || | |||| Sbjct 19236 AATTTTAGCTTTAACGTTCT-CGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTT 19178 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | ||||| || |||||||||||| Sbjct 19177 TGCCAGTTAAGGTTTTAACGAAAATCTGCATG 19146 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| |||||||||||||| || || | |||||| ||| || || ||||| || Sbjct 19571 GTAGATTCTTTTTGAATATTATAGTCTGATAGAGTGCGACCATCTTCAAGTTGTTTACCT 19512 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || |||| || | ||||||||||||||| || || ||||| | | ||| ||| ||| || Sbjct 19511 GCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTAT-CTTGAATTTTTGCTTT 19453 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | ||| | ||||| | || ||||| | || | ||||| || || | || Sbjct 19452 AACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTTTACCAGTTAATGT 19393 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || || ||||| Sbjct 19392 TTTAACGAAGATTTGCAT 19375 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| ||||||||||| || ||||| | |||||| ||| |||||||| || ||| Sbjct 20483 GTAGATTCTTTTTGAATGTTATAATCTGATAGTGTGCGACCATCTTCTAGCTGCTTACCA 20424 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || | || | || ||| ||||| ||||| || || || || | | ||| | | || || Sbjct 20423 GCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTTTAT-CTTGAATCTTAGCTTT 20365 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | ||| | ||||| | || || || | || | || || || || ||||| Sbjct 20364 GACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAATGGTCTTACCAGTAAGAGT 20305 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| |||||||||||||| Sbjct 20304 TTTGACAAAAATCTGCAT 20287 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 |||||| || | ||| | ||||| ||||| ||||| ||||| || | || ||| Sbjct 20046 TCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTACGACC 19987 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || ||||| | || || | ||| ||||| || || || || || || Sbjct 19986 ATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCTTT 19927 Query 127018 GTCCGTGATTTTCTGCTTGAGT-TGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 ||| ||| ||| |||| | | ||| | || || || ||| ||||| | ||| | Sbjct 19926 GTCT-TGAATTTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGTAA 19868 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || | || || |||||||||||||| Sbjct 19867 TAGTTTTCCCAGTTAATGTCTTCACAAAAATCTGCAT 19831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474598454019360