Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2770 118 1e-21 >seq2770 Length=41231 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| |||| ||| | |||||||| |||||||| ||||| || Sbjct 20744 ATACCACCACGAAGCCTCAAAACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCT 20685 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || ||||| || || || | || | |||||||| || || Sbjct 20684 GATAAAGTCCTGCCATCTTCTAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGA 20625 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||||||||| ||| | ||||| || || | || Sbjct 20624 GGAATCCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCT 20565 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||||| || |||| |||||| || || |||||||| Sbjct 20564 ACTTCAAGAGTTATTGTTTTACCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182 || || | ||| |||||||| || ||||||||||| |||||||| || | ||| | Sbjct 20960 AGTCTGAGCACAAGATGCAGAGTGGATTCCTTTTGAATATTATAGTCTGATAATGTTCTG 20901 Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242 ||| || | ||||||||||| | || | ||| ||||| || || |||||||||||| Sbjct 20900 CCATCTTCAAGCTGTTTTCCTGCAAAAATAAGTCGCTGCTGATCAGGAGGAATGCCTTCT 20841 Query 45243 TTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 |||||||||||||| || | ||| | || || | ||| || || ||||| Sbjct 20840 TTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCACTGGGCTCAACCTCTAGAGTT 20781 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || || | || ||||| || |||||||| Sbjct 20780 ATTGTTTTACCAGTCAAGGTCTTTACGAATATTTGCAT 20743 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | |||| || || || || || |||||||| ||||||||||| || || Sbjct 21200 ATTCCTCCTCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCA 21141 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| | ||| || | ||||||||||| |||| | | || || || || Sbjct 21140 GAAAGGGTTCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGT 21081 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||||||||| || || | ||| | || || || ||| Sbjct 21080 GGAATTCCTTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCA 21021 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | ||||| || || ||||| || |||||||||||||| Sbjct 21020 ACTTCTAATGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTGCAT 20971 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 || ||||| || || ||||| ||||| |||||||| || ||| | | || ||| | Sbjct 19583 ACAAGATGAAGGGTAGATTCTTTTTGAATATTATAGTC--TGATAGAGTGCGACCATCTT 19526 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | |||||| ||||| | || || | ||||| || || ||||| ||||| ||||||| Sbjct 19525 CAAGTTGTTTACCTGCAAAGATTAACCTCTGCTGATCGGGAGGAATTCCTTCCTTATCTT 19466 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||||||| ||| | ||||| ||||| | || ||||| | |||| |||| Sbjct 19465 GAATTTTTGCTTTAACATTTTCTATCGTGTCACTGGGTTCTACTTCTAACGTAATGGTTT 19406 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || |||| ||||| || || |||||||| Sbjct 19405 TACCAGTTAATGTTTTAACGAAGATTTGCAT 19375 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | | |||||| || | ||||| || ||||| ||||| || ||||| || Sbjct 19832 ATTCCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTC- 19774 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || | ||||| || || | || | |||||||| || | Sbjct 19773 -TGAAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAG 19715 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || |||||||||||||||||||||||| ||| | ||| | ||||| |||| Sbjct 19714 GAGGTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACT 19655 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || || | || | ||||| || || || || |||||||| || ||||| Sbjct 19654 CAACCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | ||||| | |||| ||| || |||||||| || || ||||| ||||| Sbjct 19376 ATTCCACCTCTTAGCCTGAGAACTAAATGAAGGGTTGATTCTTTCTGAATATTGTAATC- 19318 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || | ||| || || || | || || ||||| || || | Sbjct 19317 -TGAAAGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAAAATTAAACGTTGTTGATCAG 19259 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287 | ||||| ||||| || ||||||| |||| | || | || | || | |||||| Sbjct 19258 GTGGAATACCTTCCTTGTCTTGAA-TTTTAGCTTTAACGTTCTCGATGGTGTCACTTTGT 19200 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| ||||| | |||||||| |||| ||||| || ||||| ||||| Sbjct 19199 TCAACTTCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAACGAAAATCTGCAT 19147 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||| | ||||| || || || ||||||||||| || || || || Sbjct 20288 ATACCACCACGAAGCCGGAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCA 20229 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || | ||| || || || ||||||||| || || || | Sbjct 20228 --GACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAG 20171 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || || |||||||||||||||||||| || | ||| | ||||||| || | Sbjct 20170 GTGGGATTCCTTCTTTATCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTT 20111 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | || | || || || || ||||| |||||||| |||||||| Sbjct 20110 CAACTTCTAATGTTATTGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 20059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA- 45184 || || || || || || || ||||| ||||| || |||||||| ||| || | || Sbjct 20501 CTTAATACAAGGTGAAGTGTAGATTCTTTTTGAATGTTATAATC--TGATAGTGTGCGAC 20444 Query 45185 -ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTT 45243 ||| || | || || || || | || | || || || || || ||||| ||||||| Sbjct 20443 CATCTTCTAGCTGCTTACCAGCAAAAATGAGTCTCTGTTGATCAGGAGGAATACCTTCTT 20384 Query 45244 TATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303 |||||||||| || ||||| ||| | ||||| | || || || || |||| Sbjct 20383 TATCTTGAATCTTAGCTTTGACATTTTCAATTGTGTCACTTGGTTCCACCTCAAGTGTAA 20324 Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || |||||||| |||||||| ||||| Sbjct 20323 TGGTCTTACCAGTAAGAGTTTTGACAAAAATCTGCAT 20287 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | || || | ||| ||||| || || ||||| ||||| ||||| ||||| Sbjct 21541 ATGCCTCCTCTAAGTCTAAGCACCAGATGAAGAGTAGATTCTTTTTGTATATTGTAATCT 21482 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| || | |||||| || || | || | | ||||| || || Sbjct 21481 GATAATGTTCTACCATCCTCTAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCTGGT 21422 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| ||||| |||||||||||| || | ||||| || || || ||| Sbjct 21421 GGAATGCCCTCTTTGTCTTGAATTTTTGCCTTCACATTTTCTATAGTATCACTAGGCTCA 21362 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||||| | ||||| || || || || Sbjct 21361 ACTTCTAAAGTAATAGTCTTTCCTGT 21336 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 45112 TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGC 45171 |||| || || || | ||| || | |||||| || |||||||||||||| ||||||| | Sbjct 22641 TTCCACCACGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAAT--C 22584 Query 45172 TGAC--GGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 |||| |||| | ||| |||| || || || || | || | || || || || || Sbjct 22583 TGACAAGGTTCTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGG 22524 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 |||||||| |||||||| || || ||| ||| | || | ||| || | || Sbjct 22523 GGGAATGCCCTCTTTATCCTGGATCTTTGCTTTTACATTCTCAATGGTATCACTGGGTTC 22464 Query 45290 GACTTCGAGAGTAACCGTTTTGCC 45313 ||||| ||||||| ||||| || Sbjct 22463 AACTTCTAGAGTAATAGTTTTACC 22440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451145444827440