Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_012662.1 Length=43931 Score E Sequences producing significant alignments: (Bits) Value seq3139 385 1e-102 >seq3139 Length=44538 Score = 385 bits (426), Expect = 1e-102 Identities = 605/866 (70%), Gaps = 0/866 (0%) Strand=Plus/Plus Query 38566 GACTTCGCGTACGTTGGTATGCGATTCCTTGGGTTCGACTTAACAGACATGCAAGCAGAC 38625 ||||| ||| | | || ||||| ||||| || ||||| | || |||||| || Sbjct 8410 GACTTTGCGGAGCTGGGGATGCGCTTCCTCGGCTTCGAACTCACGCCAATGCAAAGGGAT 8469 Query 38626 ATTGCTCAGTACATGCAGCACGGCCCTCGTAAGAAGATGGTGTGTGCACAGCGTGGTGAG 38685 |||||| |||||||||||| ||||| | || | |||||| ||||||||||| ||| Sbjct 8470 ATTGCTTGGTACATGCAGCATGGCCCAAGGAACAGCATGGTGGCGGCACAGCGTGGGGAG 8529 Query 38686 GCAAAGAGTACACTTGCTGCTCTGTACAGCGTGTGGCGTCTTATCCAAGACCAGAGCACA 38745 || ||| || || ||||| |||| | |||||| ||||||| ||||| | Sbjct 8530 GCCAAGTCCACCCTGGCTGCGCTGTTCGCTGTGTGGAACCTTATCCGTGACCAATCCTAC 8589 Query 38746 CGTGTCCTTATTGTATCCGGTGGTGAGAAACAGGCATCCGAGGTTGCAACCCTTGTTATC 38805 || || || ||||| |||||||||||| ||||| ||||| |||||| | |||||| Sbjct 8590 CGGGTACTGATTGTCTCCGGTGGTGAGGCGCAGGCGTCCGACGTTGCACTGTTAGTTATC 8649 Query 38806 CGTTTGATTGAGACATGGGACTTGCTGTGTTGGCTACGTGCTGACCCTGCTCGTGGCGAC 38865 || |||||||| |||| |||||| || ||| |||| | ||| | ||||| ||| Sbjct 8650 CGAATGATTGAGCAGTGGGGCTTGCTATGCTGGTTACGGCCAGACAGCACCCGTGGTGAC 8709 Query 38866 CGTACCTCATACGAGGGTTACGATGTTCACTGTGACTTGAAACCGCTAGAGAAAGCACCA 38925 ||||| || |||| | || || || ||||| ||| |||| || || || ||| | | Sbjct 8710 CGTACATCGTACGCGAACTATGACGTACACTGCGACCTGAAGCCCCTGGATAAATCCGCC 8769 Query 38926 TCCGTGGCTTGTGTGGGTATCACCGCTCAGCTACAGGGTAAGCGTGCTGACTTGTTAATC 38985 |||||| || || ||||||||||| | ||||||||||||||||| || | || Sbjct 8770 AGCGTGGCATGCGTAGGTATCACCGCATCCTTGCAGGGTAAGCGTGCTGATCTGCTGATT 8829 Query 38986 CCCGATGATATTGAGACGACCAAGAACGGTCTGACTCAAACACAGCGTGAGCACTTGCTG 39045 || |||||||| ||||| || || ||||||||||| ||| | ||||| ||||| Sbjct 8830 CCAGATGATATCGAGACTACGAACAACGGTCTGACGGCTACAAACCGTGAAGTGCTGCTG 8889 Query 39046 ACAATCTCGAAAGACTTTGCGGCAATCAACACGCACGGCGATACACTTTATCTGGGTACA 39105 ||| || ||||| | || || || |||||||| | || || || ||||| ||| Sbjct 8890 TTGCGCTCCAAGGACTTCTCCGCGATTAATACGCACGGGAAGACTCTGTACCTGGGGACA 8949 Query 39106 CCTCAGACTAAAGACAGTATCTATAAGACACTACCCTCGCGTGGTTTTGAAGTACGAGTG 39165 || ||||| |||||||||||||| ||||| || | ||||||| ||||| | || || Sbjct 8950 CCGCAGACCAAAGACAGTATCTACAAGACCCTGGCGGCGCGTGGCTTTGAGATTCGCGTA 9009 Query 39166 TGGTGTGGACGTATCCCGTCTGTAGAGCAAGAGGAAAAGTACGGCGACACATTAGCCCCG 39225 ||| ||| || | || | ||||| |||||||| |||| || ||||| || ||| Sbjct 9010 TGGCCTGGTCGCGTACCTACCGTAGAAGAAGAGGAACGTTACGCCGGAACATTGGCTCCG 9069 Query 39226 TACATCAAGATGCTGATTGAGCAGGGCGCACGACGCACTGGCTTCGGCGTTGATGGTACG 39285 || || | ||||| | | ||||| || || || |||||| | || || | Sbjct 9070 ATGATTCAGGAGATGATTCGGAACGGCGCGGCGCGTACAGGTTTCGGCCTGGACGGCAAC 9129 Query 39286 CTTGGAGAAACTACTGACCCTCAGCGTTACGACGAGGGCGCGTTGATAGAGAAAGAGCTG 39345 | || || || ||||| ||||||| || | | || || | || || || Sbjct 9130 CGCGGCGAGGTAACCGACCCCATGCGTTACACGGAAGATGATTTAATCGGCAAGGAACTT 9189 Query 39346 GACTTCGGCCCAGAGGGTTTCGCATTACAGTACATGCTGGATACAACCCTATCAGATGCG 39405 ||||||||||| ||||| ||| || ||||||||||||||||| | ||| | ||||| Sbjct 9190 GACTTCGGCCCTGAGGGGTTCCAGTTGCAGTACATGCTGGATACGTCACTAGCTGATGCA 9249 Query 39406 ATGCGTACGCGTATCAAACTGTCTGA 39431 |||||| ||||| || || || || Sbjct 9250 CAGCGTACCCGTATTAAGCTCTCAGA 9275 Score = 113 bits (124), Expect = 1e-20 Identities = 220/323 (68%), Gaps = 4/323 (1%) Strand=Plus/Plus Query 39577 CCGTACAAGCACAAAATCATGGTAATCGACCCTGCTGGTTGTGGTGGTGATGAAATCTCC 39636 ||||| |||| || ||||||| |||||||| || ||||||||||| || ||| | || Sbjct 9421 CCGTATCAGCATAAGGTCATGGTCATCGACCCGGCCGGTTGTGGTGGGGACGAAGTGGCC 9480 Query 39637 TTTGCAATCGGTGGTGCTGCTAGTGCGTACGTGCACTTGTTCGGCACAGGTGGTTTCCAA 39696 || || |||||| || | ||||| | ||| |||| || |||||| | || Sbjct 9481 TTCGCGTGCGGTGGGGCACTGAACTCGTACATTCACCTGTTTGGTGTTGGTGGTCTACAG 9540 Query 39697 GGTGGTGTGTCTGAGGAAAACATGAACCGCTTGATTGACTTAGCTGAGGACTTCGAAGTT 39756 || ||| || |||||| ||| |||| | |||||| | |||||||| |||| | Sbjct 9541 GGAGGTTTGGTTGAGGAGAACCTGAATAAGCTCATTGACCTGGCTGAGGAGTTCGGTATC 9600 Query 39757 AAGGACATCGTTATCGAGAGCAACATGGGTCACGGTACAGTTACAATGCTGTTCCAGAAT 39816 | ||| || || || ||| |||||||| ||||| || | | |||||| | | ||| Sbjct 9601 ACGGATATTGTGATGGAGGCAAACATGGGCCACGGCACGGCAAGTATGCTGCTGCTGAAC 9660 Query 39817 GCCCTAGCGCAACGTGACATTGCACACATTGGTGTACGCGAC--TTACGTAACAGTACGC 39874 ||||| || | || || | |||| ||||| || ||| ||||| || || Sbjct 9661 GCCCTGGCTAAGCGCCGTATCACGAACATCGGTGTGCGGGACATTTACG--CCAAGGGGC 9718 Query 39875 AGAAAGAACGTCGTATCATCGAC 39897 |||| || || ||||| || ||| Sbjct 9719 AGAAGGAGCGCCGTATTATTGAC 9741 Score = 105 bits (116), Expect = 2e-18 Identities = 175/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 9245 TGGGAGCGTATGGACGCCCTGCTGAGCTTTGCTTTCTGTGAGTGGTTCGGCTTGTACGTG 9304 ||||||||| || || |||||| || |||| |||||||| ||||| ||||||| Sbjct 26104 TGGGAGCGTTGTGATGCGCTGCTGGCATTCGCTTACTGTGAGTTCTTCGGTCTGTACGTA 26163 Query 9305 AACATGCCAGTAGCTCAGAAGAACCAAGCGGTGCAGGAAGCTGAGATTGCAGAGCTAACC 9364 || | || || | ||||||| || | |||||||| |||||||| ||| | Sbjct 26164 GACCGGGACGTGGCGAACAAGAACCTGGCCGAACAGGAAGCGGAGATTGCGGAGTTGCGT 26223 Query 9365 ACTCGCCT-CAGAACGTACTTACCTGATGACCTACCAGAAGAAATTGACTTCAACTGGGG 9423 | | || ||| | | ||| || | ||| |||||| || | || ||||||||||| Sbjct 26224 GCGCAGCTACAGGAACT-CTTGCCGAAGGACTTACCAGCTGAGCTAGAATTCAACTGGGG 26282 Query 9424 TTCTGACTTCCACATGTCGGCGTTGCTGTACGGTGGCCCGATTAAGTACAAGAAGAAAGT 9483 | |||| ||||||||| || || |||| ||||| ||| | ||||||||| | || || Sbjct 26283 TAGCGACTACCACATGTCCGCCCTGGTGTATGGTGGGCCGGTGAAGTACAAGCACAAGGT 26342 Query 9484 GCACTACGAC 9493 | |||||| Sbjct 26343 TCCGTACGAC 26352 Score = 105 bits (116), Expect = 2e-18 Identities = 522/815 (64%), Gaps = 46/815 (6%) Strand=Plus/Plus Query 10169 GTTAAAGAAATGTTTACCTCACGCTTTGGCGAAGATGGTCGCATCATTGAGGTGGACTAC 10228 ||||| | ||||| ||| || || || || | |||||||||||||||||||| ||| Sbjct 26974 GTTAAGCAGATGTTCACCAGCCGATTCGGTGAGAACGGTCGCATCATTGAGGTGGATTAC 27033 Query 10229 TCTGCACTGGAAGTTGTAATGGGCGTTGTAC-AT-ACAGGCGATATGAAGCTACTTGAGC 10286 || ||||||||||||||||| || ||| | || ||| | |||||| | | || | || Sbjct 27034 TCCGCACTGGAAGTTGTAAT--GCTCTGTGCGATGACACGGGATATGGACTTGCTGGCGC 27091 Query 10287 TGCTTAAAGCTGGTACTGATATGCACTGTTACCGCCTAGCGTTCCAAGAGAACCTAGACT 10346 || | | |||| ||||| |||||||| || || || |||| || | | | | Sbjct 27092 TGTTACAGGCTGACACTGACATGCACTGCTATCGACTGGCGTACCGCCTGGGCGAATCGT 27151 Query 10347 ATGAAGAGGTGTATCGTCGCTGTCATGACGAGGGCTTCGAGTTCCATGCTCTGTGGAAGT 10406 | || || ||||| || || |||| | | | || || ||| Sbjct 27152 ACGAGGATGTGTACGAGAAGTGCCACAACGAAGAACACCCGGAGCACAAGAAGTACAAGC 27211 Query 10407 CAATGCGTACTGCAATCAAAGCACCTAGT--TTTGCGGCTCAGTATGGCGCGTCAGCCGC 10464 ||||| || | || |||| || || ||||| | ||||| || || | || || Sbjct 27212 AGATGCGAACGGATAT-TAAGCCGCT-GTCATTTGCTGACCAGTACGGTGCTACGGCAGC 27269 Query 10465 TGGTATCGCATTCGCTACTGGTTGTACTGTCGAGTTCGCTCAAGCGTTCCTAGACAACGA 10524 || | || ||| || |||||| || | ||||||||| ||| |||| | ||||| Sbjct 27270 CGGCCTGGCGTTCAACACCGGTTGTTCTATTGAGTTCGCTGAAGAATTCCAGGCGAACGA 27329 Query 10525 GGCGGCGCTATTCCCAGAC-ACTGCTAAGTTCCGTCAGGTAATCCGTGATGAAGTTGAGC 10583 ||| | | ||||| ||| | | |||||| || || || |||||| || |||| Sbjct 27330 AGCGAAGATGTTCCC-GACTTCCCGTGGGTTCCGCCAAGTCATTATTGATGAGGTAGAGC 27388 Query 10584 GCACTGGTAACTTACCGGGTAACTTGAAGCGCGAAATGACTGATGATGGTTCTGTCCGTC 10643 | |||||| | ||||| | | | | || || ||| | || | ||| | ||| Sbjct 27389 GAACTGGTTCACTGCCGGGCAGCATCCACCGTGAGATGGCGGACAACGGTACATGGCGTG 27448 Query 10644 TGTACCGCCGTGGGTAC-----TGGAC--ATCACCTGCTGGTATGCGTTACAGCTTCCGT 10696 |||| || ||||||||| ||| | | ||| | |||||||||||||| Sbjct 27449 TGTATCGTCGTGGGTACTACCGTGGGCCGAGCAC-------AACATGTTACAGCTTCCGT 27501 Query 10697 CAGGTTGAGCGTTGGGTTAAGCGTGCTGATGGTCGTGGTATGGAGAAAGTCATGGACTAC 10756 ||| || ||| || ||| ||||||| || |||||||||||||| Sbjct 27502 CAGCACGA-CGT---GT--GGCG---TGATGGT---------AAGCAAGTCATGGACTAC 27543 Query 10757 AAGGATACACAGCTTGCTAACTACTGGTGTCAAGGCGAGGCATTCTTCCTCATG-GCGGT 10815 || || ||| | ||||||||| | || || ||||| ||| | ||| ||| Sbjct 27544 AAACCAACCCAGATGGCTAACTACCCATTCCAGGGTGAGGCTGGGTTCATGATGAGCG-- 27601 Query 10816 TGCGTTCGGTATGATTCTG-CGCCACATGATTGCTAAGAACTGGTACGACAACCAAGTAT 10874 | || || | |||| ||| | || ||| |||||| ||| || || | Sbjct 27602 TAAGTATGGGGCGTATCTGCCGCTGGTTAATCAGTAAAGACTGGTTCGATGGGCAGGTGT 27661 Query 10875 GTCTAATCACGAACGTTCACGATGCTGCGTACCTAGACGCTGCGAACGAGGAAGTGGGGC 10934 || | || | ||||| |||||||| |||||| | || || || ||| ||| || || | Sbjct 27662 GTTTGATTAACAACGTACACGATGCAGCGTACATGGATGCAGCAAACCCGGAGGTAGGTC 27721 Query 10935 GTGAGGCTGCACTAGCTGTGAAAGACATCATGGAG 10969 ||||||| || || | || ||| | ||||||||| Sbjct 27722 GTGAGGCAGCCCTGGGTGCGAAGGCAATCATGGAG 27756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140204384267724