Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_013638.1 Length=43144 Score E Sequences producing significant alignments: (Bits) Value seq3139 105 2e-18 >seq3139 Length=44538 Score = 105 bits (116), Expect = 2e-18 Identities = 551/864 (64%), Gaps = 49/864 (6%) Strand=Plus/Plus Query 12946 CTGGACAAGGACAATGGCACGTACTATATCAGCCACGAGTAC--AACAAGGACGGGTCGA 13003 || || ||||||| || |||||||| || | || ||| | ||| ||||| || Sbjct 26773 CTCGAGAAGGACACCGGAACGTACTACCTCCGACA--AGTCCTGAACGCCGACGGTACGG 26830 Query 13004 TCAA-GAAGACGAAGGGGATGTTGCAATACATAGGCCCTGACTCGATCATC---CACCAC 13059 | || ||| | |||||| ||| |||||| ||| | |||| || |||| |||||| Sbjct 26831 TGAAAGAACA-GAAGGGCATGATGCAATTCATTGA---TGACAAGAGCATCGTGCACCAC 26886 Query 13060 TCGTTGAACGTGGCTGCGACGATCACAGCACGACTGTCGTCTAGCGATCCGAACTTGCAG 13119 ||||||| | || ||| | || | |||||| || ||| | |||||| | ||| Sbjct 26887 AGCCTGAACGTTACCGCTACGGTGACTACGCGACTGAGTTCAAGCAACCCGAACCTCCAG 26946 Query 13120 AACTTGCCACGGTCGGACGAAGATGACGATGGTGTTGCGAAGTCCCGCGTGAAGGAGATG 13179 ||| | ||||| ||||| || |||| || ||| ||||| Sbjct 26947 AACCTCCCACGA---------------GATGG------GACGTCCAAGGTTAAGCAGATG 26985 Query 13180 TTCACCAGCCGCTTCGGCGACGACGGTGTGATCATCGAGGTGGACTACACTGCCCTGGAA 13239 ||||||||||| ||||| || ||||| ||||| |||||||| ||| | || |||||| Sbjct 26986 TTCACCAGCCGATTCGGTGAGAACGGTCGCATCATTGAGGTGGATTACTCCGCACTGGAA 27045 Query 13240 GTCGTAATGCTGGCCGCGCTGTCCGGCGATCAGGCGTTGCTGAAGCACTTGCAGAACGGC 13299 || |||||||| ||| || | | ||| || |||||| || || ||| | | Sbjct 27046 GTTGTAATGCTCTGTGCGATGACACGGGATATGGACTTGCTGGCGCTGTTACAGGCTGAC 27105 Query 13300 ACGGACATGCACTGTCTGCGTCTCGCTGCGAAGCTGAAGAGACCGTACGAAGAAATCCTG 13359 || ||||||||||| || || || ||| | ||||||| || | Sbjct 27106 ACTGACATGCACTGCTATCGACTGGCGTACCGCCTGGGCGAATCGTACGAGGATGTGTAC 27165 Query 13360 GCG-ATTGCGAAGGATAAACATCATCCAGAACACAA-CAGTATCAAACAGCAGCGTACCG 13417 | | | ||| | | || | || || || ||||| |||| ||| ||| ||| || | Sbjct 27166 GAGAAGTGC-CACAACGAAGAACACCCGGAGCACAAGAAGTA-CAAGCAGATGCGAACGG 27223 Query 13418 ACATCAAGCCTCCGAGCTTTGCTGCGCAGTACGGAGCTAGCGCTAGTGGCATTGCATTCG 13477 | || ||||| | | ||||||| |||||||| |||| || ||| | || ||| Sbjct 27224 ATATTAAGCCGCTGTCATTTGCTGACCAGTACGGTGCTACGGCAGCCGGCCTGGCGTTCA 27283 Query 13478 CCACGGGTGTATCTCTTGAATACGCAACTGAGTTCCTCGCAACAGAAGCCCGACTATTCC 13537 ||| ||| ||| |||| | ||| || |||| || | ||||| | |||| Sbjct 27284 ACACCGGTTGTTCTATTGAGTTCGCTGAAGAATTCCAGGCGAACGAAGCGAAGATGTTCC 27343 Query 13538 C-ACGAGCTATCGCGTTCCGCGATGTTGTGCGTGCAGAAGTTGAGCGGACGGGAGCGCTC 13596 | || | | | ||||||| | || | || || || ||||| || || | || Sbjct 27344 CGACTTCCCGT-GGGTTCCGCCAAGTCATTATTGATGAGGTAGAGCGAACTGGTTCACTG 27402 Query 13597 CCTACTGGCCTCATGCGTGAGCAAGACGACGCAGGGAACTTCCGTGTTTACCGACGCGGT 13656 || || || |||||| | ||| || | | ||||| || || || || Sbjct 27403 CCGGGCAGCATCCACCGTGAGATGGCGGACAACGGTACATGGCGTGTGTATCGTCGTGGG 27462 Query 13657 TACTACC--AAGCTGATGGAGGAACTTGTTACAGCTTCCGCCAGTTTGATGTGTGGGACG 13714 ||||||| || || | ||| |||||||||||||| ||| || |||||| || Sbjct 27463 TACTACCGTGGGCCGA--GCACAACATGTTACAGCTTCCGTCAGCACGACGTGTGG--CG 27518 Query 13715 CCGAAGCCCGCAAGCGTGTCATGGGCTTCAAGCCCACCCAAATTGCCAACTATTGGTGCC 13774 || | | |||| ||||||| || ||| || ||||| || || ||||| | || Sbjct 27519 -TGATG---GTAAGCAAGTCATGGACTACAAACCAACCCAGATGGCTAACTACCCATTCC 27574 Query 13775 AGGGTGAATCCGGGTACTTGATGA 13798 ||||||| | |||| | |||||| Sbjct 27575 AGGGTGAGGCTGGGTTCATGATGA 27598 Score = 91.5 bits (100), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 9160 ACCATCCAAGTCTCGGCAACCGATGGCGATAACGTCCTATACCCGCCTTACGGCGCACTC 9219 || || ||| |||| || |||||| ||| || || | ||| || ||| |||| ||| Sbjct 22971 ACGATTCAAATCTCCGC---CGATGGAGATGACCAGCTGTTCCCACCATACAGCGCGCTC 23027 Query 9220 AAGGATTCCAAAACAGGCGTACAGGGTGCAGTGGACATCATCTTAATGATGGGTGCATTG 9279 || || ||||| || || ||||||||||| ||||| | |||||||||||||| ||||| Sbjct 23028 AAAGACTCCAAGACGGGTGTACAGGGTGCGGTGGATGTAATCTTAATGATGGGCGCATTA 23087 Query 9280 AACG 9283 |||| Sbjct 23088 AACG 23091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137690524417208