Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2770 123 6e-23 >seq2770 Length=41231 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||| ||||| || |||||||| | ||||||||||| || ||| Sbjct 20279 CGAAGCCGGAGAACTAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAGAGTA 20220 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || ||||| || || || || | | ||| || || || |||||| Sbjct 20219 CGGCCATCTTCTAGTTGCTTACCAGCAAATATCAATCTCTGTTGATCAGGTGGGATTCCT 20160 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || ||||| || ||| ||| ||| | |||||| | | ||| || || || Sbjct 20159 TCTTTATCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGCTAGGTTCAACTTCTAAT 20100 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || ||||| || ||||| ||||| Sbjct 20099 GTTATTGTCTTACCAGTAAGAGTCTTTACAAAGATTTG 20062 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || || | ||| || ||||| || || |||| ||| ||||| | ||| || | | Sbjct 19136 AGCCTAAGAACCAAGTGTAGTGTCGATTCTTTCTGGATGTTATAGTCTGACAATGTACGT 19077 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| || ||||| || || || || || | ||||||||| ||| ||||||||| Sbjct 19076 CCATCTTCGAGTTGCTTGCCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCT 19017 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| || ||| || ||| | |||||| | | || || || || ||| Sbjct 19016 TTATCCTGAATTTTAACCTTAACATTTTCTATGGTGTCACTAGGCTCAACCTCTAATGTG 18957 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || ||||||||||| || || Sbjct 18956 ATGGTCTTGCCAGTAAGTGTTTTCACAAAGATCTG 18922 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || ||| | ||| |||||||| || || || || ||||||| |||||||||| | || Sbjct 21192 TCTAAGCCGCAGAACAAGGTGAAGTGTTGATTCTTTTTGGATATTGTAGTCAGAAAGGGT 21133 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| ||||| ||||| || || ||||| | ||| || || || |||||| Sbjct 21132 TCGACCATCTTCTAGCTGTTTTCCTGCAAATATGAGCCTCTGTTGATCAGGTGGAATTCC 21073 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| || |||||||| ||| || ||| | || || | | || || || || Sbjct 21072 TTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGCTCAACTTCTAA 21013 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| || ||||||||||| Sbjct 21012 TGTTATGGTTTTCCCAGTAAGAGTCTTAACAAAAATTTG 20974 Score = 102 bits (112), Expect = 2e-16 Identities = 109/143 (76%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || || | || ||||| || |||||||||| ||| || || | ||| || Sbjct 22633 CGAAGTCGCAAAACCAAATGCAGAGTAGATTCCTTTTGGATGTTATAATCTGACAAGGTT 22574 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||||||||||||||| || || ||||| |||||||| || || || ||| || Sbjct 22573 CTGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGATCAGGGGGAATGCCC 22514 Query 199529 TCTCGCTCCTGAATCTTTTGCTT 199551 ||| ||||| ||| ||||||| Sbjct 22513 TCTTTATCCTGGATC-TTTGCTT 22492 Score = 86.0 bits (94), Expect = 1e-11 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||| || || | ||| || || || || | ||||||||||| || || | Sbjct 20048 AGTCGCAAGACGAGATGCAAAGTAGATTCTTTCTGAATGTTGTAGTCAGATAATGTACGA 19989 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| |||||||| || || || || | | ||| || || || |||||||||| Sbjct 19988 CCATCTTCAAGCTGCTTACCAGCAAAAATTAACCTCTGTTGATCTGGTGGAATTCCTTCT 19929 Query 199532 CGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || ||||| ||| || || || ||| | || || | | ||||| || || || Sbjct 19928 TTGTCTTGAAT-TTTAGCTTTAACATTTTCAATTGTATCACTAGGCTCTACTTCTAAGGT 19870 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || | || ||||||||||| || Sbjct 19869 AATAGTTTTCCCAGTTAATGTCTTCACAAAAATCTG 19834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176628459701538