Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Latrodectus_20hesperus_20[genbank_20GCA_5F000697925.1_202014-06-04] 151,814 sequences; 1,137,104,656 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq2770 93.3 3e-14 >seq2770 Length=41231 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | || ||||| |||| || ||||||||| || ||||| || | Sbjct 19829 CCTCCTCTTAACCTCAAAACCAAGTGCAGTGTAGATTCTTTTTGAATGTTATAGTCTG-- 19772 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 ||| || || |||| || | ||||| || ||||||| | ||| |||||||| | | Sbjct 19771 AAAGCGTACGCCCATCTTCTAGCTGTTTACCAGCAAAAATGAGACGTTGCTGATCAGGAG 19712 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 ||| ||||||||| || |||||| ||| | | | | |||||| | || | Sbjct 19711 GTATGCCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGTGTCACTGGACTCAA 19652 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || || ||||||||||| || | || ||||| ||||||||||| Sbjct 19651 CCTCTAATGTTATTGTTTTACCAGTAAGTGTCTTTACAAAGATCTGCAT 19603 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 |||||| || ||||| ||||| | | | ||| |||| || | ||| || || |||| Sbjct 19338 TTCTTTCTGAATATTGTAATCTGAAAGAGTACGTCCATCCTCAAGTTGCTTACCAGCAAA 19279 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||||||||| || ||||| | || | ||||| ||||| ||||| ||||| | Sbjct 19278 AATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTT 19219 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | | ||||| ||| || || | ||| |||||||| || ||||| ||||| || Sbjct 19218 CTCGATGGTGTCACTTTGTTCAACTTCTAGAGTTATTGTTTTGCCAGTTAAGGTTTTAAC 19159 Query 39708 GAAGATCTGCATG 39720 ||| ||||||||| Sbjct 19158 GAAAATCTGCATG 19146 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 || ||||| ||||| ||||||||| || ||||| || | ||| | |||| || Sbjct 20723 ACTAAATGTAAAGTTGATTCTTTTTGGATGTTATAGTCTGATAAAGTCCTGCCATCTTCT 20664 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 ||||| || || |||| || | ||| |||||||| | || | |||||||| || Sbjct 20663 AATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATCCCTTCTTTATCTTGA 20604 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 ||||| ||||| | ||| || || ||| || || | ||| ||||||||| Sbjct 20603 ATTTTGGCTTTAACATTTTCTATCGTATCACTTGGTTCTACTTCAAGAGTTATTGTTTTA 20544 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || ||||||||||| ||||| || ||||| Sbjct 20543 CCAGTTAAAGTTTTAACGAATATTTGCAT 20515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346726885259462